Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1803219 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1575990 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 67213003 ~ 67213249 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1803200 | lncRNA | downstream | 15181 | 67197362 ~ 67197822 (-) | True | G1575972 |
| TU1803182 | lncRNA | downstream | 29659 | 67182905 ~ 67183344 (-) | True | G1575955 |
| TU1803175 | lncRNA | downstream | 37620 | 67175070 ~ 67175383 (-) | True | G1575948 |
| TU1803172 | lncRNA | downstream | 42567 | 67170222 ~ 67170436 (-) | True | G1575945 |
| TU1803146 | lncRNA | downstream | 71310 | 67141305 ~ 67141693 (-) | True | G1575920 |
| TU1803527 | lncRNA | upstream | 98944 | 67312193 ~ 67313129 (-) | True | G1576226 |
| TU1803537 | lncRNA | upstream | 108539 | 67321788 ~ 67322193 (-) | True | G1576234 |
| TU1803551 | lncRNA | upstream | 137898 | 67351147 ~ 67351584 (-) | False | G1576247 |
| TU1803552 | lncRNA | upstream | 137898 | 67351147 ~ 67351778 (-) | True | G1576247 |
| TU1803566 | lncRNA | upstream | 170894 | 67384143 ~ 67386610 (-) | True | G1576260 |
| XM_021572761.2 | mRNA | downstream | 100420 | 67108578 ~ 67112583 (-) | False | sox4a |
| XM_036951080.1 | mRNA | downstream | 154454 | 67058124 ~ 67058549 (-) | False | LOC118941008 |
| LOC118941007 | mRNA | downstream | 342077 | 66857937 ~ 66870926 (-) | False | LOC118941007 |
| XM_021572763.2 | mRNA | downstream | 402511 | 66802870 ~ 66810492 (-) | False | LOC110496725 |
| XM_021572762.2 | mRNA | downstream | 402830 | 66802870 ~ 66810173 (-) | False | LOC110496725 |
| XM_036953582.1 | mRNA | upstream | 112621 | 67325870 ~ 67337196 (-) | False | LOC110496729 |
| XM_036953583.1 | mRNA | upstream | 112621 | 67325870 ~ 67337196 (-) | True | LOC110496729 |
| XM_021572767.2 | mRNA | upstream | 128139 | 67341388 ~ 67348984 (-) | True | srfbp1 |
| XM_036953587.1 | mRNA | upstream | 194063 | 67407312 ~ 67441367 (-) | True | fndc5b |
| XM_036951081.1 | mRNA | upstream | 330312 | 67543561 ~ 67558111 (-) | True | LOC118941009 |
| TU1803205 | other | downstream | 9516 | 67203201 ~ 67203487 (-) | True | G1575977 |
| TU1803115 | other | downstream | 154330 | 67058177 ~ 67058673 (-) | True | LOC118941008 |
| TU1803003 | other | downstream | 342804 | 66869891 ~ 66870199 (-) | True | LOC118941007 |
| TU1802980 | other | downstream | 386126 | 66826582 ~ 66826877 (-) | True | G1575774 |
| TU1802944 | other | downstream | 402537 | 66803424 ~ 66810466 (-) | True | LOC110496725 |
| TU1803506 | other | upstream | 188199 | 67401448 ~ 67441976 (-) | False | G1576222 |
| TU1803513 | other | upstream | 188199 | 67401448 ~ 67441976 (-) | False | G1576222 |
| TU1803517 | other | upstream | 188199 | 67401448 ~ 67441976 (-) | True | G1576222 |
| TU1803844 | other | upstream | 701939 | 67915188 ~ 67955212 (-) | True | G1576491 |
| TU1804691 | other | upstream | 1408999 | 68622248 ~ 68626119 (-) | True | LOC118941211 |
