Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1804550 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1577101 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 68505560 ~ 68505774 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1804545 | lncRNA | downstream | 1449 | 68503858 ~ 68504111 (-) | True | G1577096 |
| TU1804234 | lncRNA | downstream | 77228 | 67991727 ~ 68428332 (-) | True | G1576824 |
| TU1804493 | lncRNA | downstream | 78996 | 68425499 ~ 68426564 (-) | True | G1577044 |
| TU1804378 | lncRNA | downstream | 258196 | 68245579 ~ 68247364 (-) | False | G1576954 |
| TU1804380 | lncRNA | downstream | 258196 | 68245579 ~ 68247364 (-) | True | G1576954 |
| TU1804553 | lncRNA | upstream | 3585 | 68509359 ~ 68509570 (-) | True | G1577104 |
| TU1804573 | lncRNA | upstream | 30224 | 68535998 ~ 68536205 (-) | True | G1577123 |
| TU1804578 | lncRNA | upstream | 31728 | 68537502 ~ 68537837 (-) | True | G1577128 |
| TU1804701 | lncRNA | upstream | 35309 | 68541083 ~ 68541384 (-) | True | G1577216 |
| TU1804703 | lncRNA | upstream | 36133 | 68541907 ~ 68602909 (-) | True | G1577218 |
| XM_036953599.1 | mRNA | downstream | 36233 | 68399984 ~ 68469327 (-) | True | LOC110496749 |
| XM_036953595.1 | mRNA | downstream | 150420 | 68332248 ~ 68355140 (-) | False | LOC110496744 |
| XM_036953594.1 | mRNA | downstream | 151082 | 68332248 ~ 68354478 (-) | False | LOC110496744 |
| XM_036953600.1 | mRNA | upstream | 36525 | 68542299 ~ 68602274 (-) | False | nt5c1aa |
| XM_036953601.1 | mRNA | upstream | 36525 | 68542299 ~ 68602274 (-) | True | nt5c1aa |
| XR_005037544.1 | mRNA | upstream | 116239 | 68622013 ~ 68624627 (-) | False | LOC118941211 |
| XM_036953602.1 | mRNA | upstream | 121102 | 68626876 ~ 68699108 (-) | True | hpcal4 |
| XM_036953605.1 | mRNA | upstream | 432831 | 68938605 ~ 68996503 (-) | False | trit1 |
| TU1803844 | other | downstream | 550348 | 67915188 ~ 67955212 (-) | True | G1576491 |
| TU1803506 | other | downstream | 1063584 | 67401448 ~ 67441976 (-) | False | G1576222 |
| TU1803513 | other | downstream | 1063584 | 67401448 ~ 67441976 (-) | False | G1576222 |
| TU1803517 | other | downstream | 1063584 | 67401448 ~ 67441976 (-) | True | G1576222 |
| TU1803205 | other | downstream | 1302073 | 67203201 ~ 67203487 (-) | True | G1575977 |
| TU1804691 | other | upstream | 116474 | 68622248 ~ 68626119 (-) | True | LOC118941211 |
| TU1805395 | other | upstream | 242838 | 68748612 ~ 68787686 (-) | True | G1577745 |
| TU1805790 | other | upstream | 807112 | 69312886 ~ 69315007 (-) | False | G1577996 |
| TU1805792 | other | upstream | 807112 | 69312886 ~ 69315007 (-) | False | G1577996 |
| TU1805797 | other | upstream | 807112 | 69312886 ~ 69315007 (-) | True | G1577996 |
