Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1805593 |
| length | 1234 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 4 |
| gene id | G1577890 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 69149203 ~ 69160821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1805586 | lncRNA | downstream | 391 | 69136620 ~ 69148812 (-) | True | G1577883 |
| TU1805585 | lncRNA | downstream | 6444 | 69134149 ~ 69142759 (-) | True | G1577882 |
| TU1805645 | lncRNA | downstream | 19178 | 69129801 ~ 69130025 (-) | True | G1577930 |
| TU1805648 | lncRNA | downstream | 21613 | 69124005 ~ 69127590 (-) | False | G1577930 |
| TU1805635 | lncRNA | downstream | 25283 | 69117232 ~ 69123920 (-) | True | G1577924 |
| TU1805657 | lncRNA | upstream | 107014 | 69267835 ~ 69269364 (-) | False | LOC110496771 |
| TU1805656 | lncRNA | upstream | 107089 | 69267910 ~ 69269364 (-) | True | LOC110496771 |
| TU1805692 | lncRNA | upstream | 111425 | 69272246 ~ 69272769 (-) | True | G1577972 |
| TU1805725 | lncRNA | upstream | 142971 | 69303792 ~ 69305421 (-) | False | G1577988 |
| TU1805726 | lncRNA | upstream | 142971 | 69303792 ~ 69305421 (-) | True | G1577988 |
| XM_021572916.2 | mRNA | downstream | 138499 | 68997269 ~ 69010704 (-) | False | myclb |
| XM_036953605.1 | mRNA | downstream | 152700 | 68938605 ~ 68996503 (-) | False | trit1 |
| XM_036953606.1 | mRNA | downstream | 152701 | 68938608 ~ 68996502 (-) | True | trit1 |
| XM_036953602.1 | mRNA | downstream | 450095 | 68626876 ~ 68699108 (-) | True | hpcal4 |
| XR_005037544.1 | mRNA | downstream | 524576 | 68622013 ~ 68624627 (-) | False | LOC118941211 |
| XM_036953616.1 | mRNA | upstream | 77222 | 69238043 ~ 69262803 (-) | False | spag1a |
| XM_036953615.1 | mRNA | upstream | 77222 | 69238043 ~ 69262805 (-) | False | spag1a |
| XR_005037545.1 | mRNA | upstream | 77222 | 69238043 ~ 69262805 (-) | False | spag1a |
| XM_036953617.1 | mRNA | upstream | 77222 | 69238043 ~ 69262807 (-) | True | spag1a |
| XM_021572807.2 | mRNA | upstream | 107089 | 69267910 ~ 69269425 (-) | False | LOC110496771 |
| TU1805395 | other | downstream | 361517 | 68748612 ~ 68787686 (-) | True | G1577745 |
| TU1804691 | other | downstream | 523084 | 68622248 ~ 68626119 (-) | True | LOC118941211 |
| TU1803844 | other | downstream | 1193991 | 67915188 ~ 67955212 (-) | True | G1576491 |
| TU1803513 | other | downstream | 1707227 | 67401448 ~ 67441976 (-) | False | G1576222 |
| TU1805790 | other | upstream | 152065 | 69312886 ~ 69315007 (-) | False | G1577996 |
| TU1805792 | other | upstream | 152065 | 69312886 ~ 69315007 (-) | False | G1577996 |
| TU1805797 | other | upstream | 152065 | 69312886 ~ 69315007 (-) | True | G1577996 |
| TU1805967 | other | upstream | 406363 | 69567184 ~ 69568164 (-) | True | G1578111 |
| TU1805993 | other | upstream | 443439 | 69604260 ~ 69606902 (-) | True | G1578132 |
