Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1805165 |
| length | 502 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1577567 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 69615279 ~ 69616967 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
69,614,800
69,615,200
69,615,600
69,616,000
69,616,400
69,616,800
69,617,200
69,617,600
69,618,000
69,618,400
69,618,800
69,619,200
69,619,600
NC_048582.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1805231 | lncRNA | upstream | 8010 | 69607904 ~ 69608456 (+) | True | G1577621 |
| TU1805223 | lncRNA | upstream | 31233 | 69581812 ~ 69585233 (+) | True | G1577613 |
| TU1805222 | lncRNA | upstream | 31731 | 69581812 ~ 69584735 (+) | False | G1577613 |
| TU1805221 | lncRNA | upstream | 32107 | 69581812 ~ 69584359 (+) | False | G1577613 |
| TU1805220 | lncRNA | upstream | 34039 | 69581812 ~ 69582427 (+) | False | G1577613 |
| TU1805229 | lncRNA | downstream | 14500 | 69631467 ~ 69632476 (+) | True | G1577619 |
| TU1805249 | lncRNA | downstream | 16061 | 69633028 ~ 69633373 (+) | True | G1577629 |
| TU1805256 | lncRNA | downstream | 22999 | 69639966 ~ 69640487 (+) | True | G1577634 |
| TU1805258 | lncRNA | downstream | 27327 | 69644294 ~ 69644578 (+) | True | G1577636 |
| TU1805284 | lncRNA | downstream | 77890 | 69694857 ~ 69695057 (+) | True | G1577659 |
| XM_036953635.1 | mRNA | upstream | 2924 | 69519227 ~ 69613542 (+) | False | LOC110496907 |
| XM_036953636.1 | mRNA | upstream | 2924 | 69519227 ~ 69613542 (+) | False | LOC110496907 |
| XM_036953637.1 | mRNA | upstream | 2924 | 69535162 ~ 69613542 (+) | True | LOC110496907 |
| XM_036953630.1 | mRNA | upstream | 136826 | 69375283 ~ 69479640 (+) | False | LOC110496778 |
| XM_021572800.2 | mRNA | downstream | 5995 | 69622962 ~ 69625389 (+) | True | LOC110496767 |
| XM_036951082.1 | mRNA | downstream | 342093 | 69959060 ~ 69963271 (+) | True | LOC118941012 |
| XM_036953638.1 | mRNA | downstream | 575294 | 70192261 ~ 70385585 (+) | False | LOC110519153 |
| XM_036953641.1 | mRNA | downstream | 882508 | 70499475 ~ 70549993 (+) | False | LOC110504292 |
| XR_005037547.1 | mRNA | downstream | 882513 | 70499480 ~ 70549993 (+) | False | LOC110504292 |
| TU1805166 | other | upstream | 123 | 69615279 ~ 69616343 (+) | False | G1577567 |
| TU1805061 | other | upstream | 241549 | 69360648 ~ 69374917 (+) | True | si:ch211-215i13.3 |
| TU1804948 | other | upstream | 486731 | 69127890 ~ 69129735 (+) | False | mfsd2ab |
| TU1804832 | other | upstream | 840204 | 68768387 ~ 68776262 (+) | True | G1577314 |
| TU1804223 | other | upstream | 1137798 | 68478073 ~ 68478668 (+) | True | G1576816 |
| TU1805334 | other | downstream | 145746 | 69762713 ~ 69764253 (+) | True | G1577699 |
| TU1806376 | other | downstream | 576087 | 70193054 ~ 70299125 (+) | True | LOC110519153 |
| TU1806556 | other | downstream | 801892 | 70418859 ~ 70419273 (+) | True | G1578630 |
| TU1807779 | other | downstream | 2521190 | 72138157 ~ 72138592 (+) | True | G1579579 |
| TU1807826 | other | downstream | 2610364 | 72227331 ~ 72227659 (+) | True | G1579615 |
