RNA id: TCONS_00004650


Basic Information

Item Value
RNA id TCONS_00004650
length 1551
RNA type mRNA
GC content 0.61
exon number 7
gene id XLOC_002482
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 236457 ~ 244745 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGTGCTGATCTGAGGACGTTCATCATTCTACAAACAGtGTTTCTCTGTGCTCCAGGATGGGTTTCGGCAGCAGTGGTGAACTGATGGACCGGTCAAATGTCAGCTTCTGCTCGGGCTCGTGTCACGCTGAGCACATCCTGCAGGTGCTGAACTCCTACAGACGCAGCGGCACCTTCACTGATGTGGTTCTGCTGGTGGACGGCTGTGAGTTCCCCTGTCACCGCGCCACGCTCTGCGCCAGCAGCGGATTCTTCCGGACCATGTTCGGCAGCCACTTCACAGAGAGCCGGCAGGCCGCGGTCACCCTGCAGGACGTCTCCAGAGCCGCCATGGAGAAACTGCTGGACTTCATGTATGAGGGCAGACTGACGCTGGACGAGGAGAATGTGCAGAGCGTCTTCCAGgcgGCGGATCGTCTGGATGTGCCGGTGCTGTATAAAGCATGTGTGCAGTTCCTGCAGGAGCGCGTCAGCCACTGCAACTGTCTGGGCCTGATGTCGTTCGCTCACGCATACGGTCTGCAGCCACTGCAGGAGCAGTGTGAGACGCTGCTTTACCGGGACCTCCAGCAGATCCTGCGGCACCCGGAGTTCCTTCAGCTGGAGAAGCAGCAGGTGCTGGATGTGCTGTGCTGCGAGCGGCTGCAGGTGCGGGAGGAGGTGCTGGTGGAGGCGGCGCTGCGCTGGGTGCACCAACAGCCGGCCAAGAGGAGCGCACACCTGCGGGAGCTGCTGGAGCCCCTGCGCCTGCCTCTGCTGGACCAGGCCTTCTTCTGCGGGACTCTGGAGGCGGACGAGATGGTGCGGGACCAGCCCGAGCTCAGAGACCTGCTGCAGGAGGCGCGCCTGTACCACGCTTACGGCCGAGAGGTGCAGTCCAAGCGCACCACACCCCGACCgcgcTCCGGCTGGGCAGAGATGATCTTCGTGTTCGGCGGCTGTGATAAGAGCGGGTTCTCCAGACTCTCCTTCATGGAGAAGCTGAACGTGTGTTCAGGACAGTGGCAGGGGGCCGCCGCCGTGCCCGGATACTGCAAATCTGAGTTTGCTGCCTGCGAACTGCAGAACGACATCTATCTGTCAGgtggtcAGCTGAACAGTGCAGATGTCTGGCGCTTCATGTCATCTCTAGGTCAGtgggtgcgtgtgtgtgcgctcaGCCGCGGCCGCTGGAGGCACAAGATGGTGTCGCTGTGTGGGAAGctgtaTGTGGTGGGCGGGTATAACGGTCGTGAGCGTGTGTCCACCGTGGAGCGCTACAGTCCTCATGAGAACAGCTGGATCAGCGTGTCGGAGCTCCCGCTGCCGGTCAGTTCAGCCGCTCTGGCCAGCTGCTGTGGGAAACTCTACGTCATCGGAGGAGCCATCAGCGACCACGCCAACACTAACCAGgtGCAGTGTTATGACCCTCTGACTGACAGCTGGTCATCCGTGTCTCCATGCCCGTTCTCTCATCGCTCCATCAGTGCAGTCTCGCTCAACGGCTCTATCTACGTGGCTGGAGGATTGATGGAGCACATCTACTGTTACACACCCAGTAAAGACTGCTGGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-091118-66 Orthologous to human KLHL35 (kelch like family member 35).

Ensembl:

ensembl_id ENSDART00000136551

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00004649 lncRNA downstream 27871 207082 ~ 208586 (-) True XLOC_002481
TCONS_00005958 lncRNA downstream 55753 179863 ~ 180704 (-) True XLOC_002480
TCONS_00005957 lncRNA downstream 60895 167409 ~ 175562 (-) True XLOC_002479
TCONS_00005956 lncRNA downstream 66037 167409 ~ 170420 (-) False XLOC_002479
TCONS_00005955 lncRNA downstream 66801 167409 ~ 169656 (-) False XLOC_002479
TCONS_00005738 lncRNA upstream 63104 307849 ~ 309853 (-) True XLOC_002484
TCONS_00005739 lncRNA upstream 109348 354093 ~ 354657 (-) True XLOC_002488
TCONS_00005740 lncRNA upstream 111810 356555 ~ 358707 (-) True XLOC_002489
TCONS_00005959 lncRNA upstream 171252 415997 ~ 420862 (-) False XLOC_002491
TCONS_00005960 lncRNA upstream 171252 415997 ~ 420918 (-) False XLOC_002491
TCONS_00004648 mRNA downstream 25754 206996 ~ 210703 (-) False XLOC_002481
TCONS_00004647 mRNA downstream 68675 161660 ~ 167782 (-) False XLOC_002479
TCONS_00004646 mRNA downstream 101025 124995 ~ 135432 (-) True XLOC_002478
TCONS_00004645 mRNA downstream 115877 116115 ~ 120580 (-) True XLOC_002477
TCONS_00004642 mRNA downstream 127505 82303 ~ 108952 (-) False XLOC_002476
TCONS_00004651 mRNA upstream 39558 284303 ~ 298448 (-) False XLOC_002483
TCONS_00004652 mRNA upstream 39560 284305 ~ 302827 (-) False XLOC_002483
TCONS_00004653 mRNA upstream 39609 284354 ~ 300000 (-) True XLOC_002483
TCONS_00004654 mRNA upstream 59851 304596 ~ 309894 (-) False XLOC_002484
TCONS_00004655 mRNA upstream 66977 311722 ~ 322769 (-) False XLOC_002485
TCONS_00004640 other downstream 160266 73450 ~ 76191 (-) True XLOC_002475
TCONS_00004639 other downstream 162067 72433 ~ 74390 (-) False XLOC_002475
TCONS_00004658 other upstream 95167 339912 ~ 340027 (-) True XLOC_002487
TCONS_00004703 other upstream 2621975 2866720 ~ 2875735 (-) False XLOC_002517
TCONS_00004704 other upstream 2623733 2868478 ~ 2875735 (-) True XLOC_002517
TCONS_00004722 other upstream 3261795 3506540 ~ 3506654 (-) True XLOC_002529
TCONS_00004723 other upstream 3523906 3768651 ~ 3768766 (-) True XLOC_002530

Expression Profile

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