RNA id: trnae-cuc-304



Basic Information


Item Value
RNA id trnae-cuc-304
length 72
RNA type mRNA
GC content 0.67
exon number 1
gene id trnae-cuc-304
representative True

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3236294 ~ 3236365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tccctggtggtctagtggttaggattcggcgctctcaccgccgcggcccgggttcggttcccggtcagggaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1813023 lncRNA upstream 43065 3191892 ~ 3193229 (+) True G1583686
TU1813004 lncRNA upstream 82092 3153879 ~ 3154202 (+) True G1583675
TU1812971 lncRNA upstream 116400 3118237 ~ 3119894 (+) True LOC110510463
TU1812986 lncRNA upstream 122030 3113982 ~ 3114264 (+) True G1583658
TU1812983 lncRNA upstream 131488 3104490 ~ 3104806 (+) True G1583655
TU1813187 lncRNA downstream 53892 3290257 ~ 3290466 (+) True G1583783
TU1813223 lncRNA downstream 76694 3313059 ~ 3314801 (+) True LOC110534750
TU1813240 lncRNA downstream 87217 3323582 ~ 3372508 (+) True G1583811
TU1813227 lncRNA downstream 115463 3351828 ~ 3354825 (+) True LOC118941411
TU1813246 lncRNA downstream 126286 3362651 ~ 3363004 (+) True G1583817
trnae-cuc-303 mRNA upstream 971 3235252 ~ 3235323 (+) True trnae-cuc-303
trnae-cuc-302 mRNA upstream 1152 3235071 ~ 3235142 (+) True trnae-cuc-302
trnae-cuc-301 mRNA upstream 1973 3234250 ~ 3234321 (+) True trnae-cuc-301
trnae-cuc-300 mRNA upstream 2154 3234069 ~ 3234140 (+) True trnae-cuc-300
trnae-cuc-299 mRNA upstream 2975 3233248 ~ 3233319 (+) True trnae-cuc-299
trnae-cuc-305 mRNA downstream 110 3236475 ~ 3236545 (+) True trnae-cuc-305
trnae-cuc-306 mRNA downstream 290 3236655 ~ 3236726 (+) True trnae-cuc-306
trnae-cuc-307 mRNA downstream 2313 3238678 ~ 3238749 (+) True trnae-cuc-307
trnae-cuc-308 mRNA downstream 2495 3238860 ~ 3238931 (+) True trnae-cuc-308
trnae-cuc-309 mRNA downstream 2676 3239041 ~ 3239112 (+) True trnae-cuc-309
TU1812930 other upstream 164651 3032519 ~ 3071643 (+) False LOC110517772
TU1812241 other upstream 345488 2889284 ~ 2890806 (+) False LOC118941397
TU1812242 other upstream 345566 2889026 ~ 2890728 (+) False LOC118941397
TU1812367 other upstream 421000 2813874 ~ 2815294 (+) False G1583215
TU1813281 other downstream 196351 3432716 ~ 3435612 (+) False LOC110534752
TU1813282 other downstream 196351 3432716 ~ 3435612 (+) True LOC110534752
TU1813330 other downstream 247281 3483646 ~ 3485420 (+) True LOC110497289
TU1813430 other downstream 381473 3617838 ~ 3622788 (+) False LOC110497294
TU1813447 other downstream 404284 3640649 ~ 3642876 (+) True G1583951