RNA id: trnae-cuc-361


Basic Information

Item Value
RNA id trnae-cuc-361
length 72
RNA type mRNA
GC content 0.64
exon number 1
gene id trnae-cuc-361
representative True

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3280757 ~ 3280828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tccctggtggtctagtggttaggattcggcgctctcaccgccgtggcccgggttcgattcccggtcagggaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1813023 lncRNA upstream 87528 3191892 ~ 3193229 (+) True G1583686
TU1813004 lncRNA upstream 126555 3153879 ~ 3154202 (+) True G1583675
TU1812971 lncRNA upstream 160863 3118237 ~ 3119894 (+) True LOC110510463
TU1812986 lncRNA upstream 166493 3113982 ~ 3114264 (+) True G1583658
TU1812983 lncRNA upstream 175951 3104490 ~ 3104806 (+) True G1583655
TU1813187 lncRNA downstream 9429 3290257 ~ 3290466 (+) True G1583783
TU1813223 lncRNA downstream 32231 3313059 ~ 3314801 (+) True LOC110534750
TU1813240 lncRNA downstream 42754 3323582 ~ 3372508 (+) True G1583811
TU1813227 lncRNA downstream 71000 3351828 ~ 3354825 (+) True LOC118941411
TU1813246 lncRNA downstream 81823 3362651 ~ 3363004 (+) True G1583817
trnae-cuc-360 mRNA upstream 978 3279708 ~ 3279779 (+) True trnae-cuc-360
trnae-cuc-359 mRNA upstream 1159 3279527 ~ 3279598 (+) True trnae-cuc-359
trnae-cuc-358 mRNA upstream 2201 3278485 ~ 3278556 (+) True trnae-cuc-358
trnae-cuc-357 mRNA upstream 3209 3277477 ~ 3277548 (+) True trnae-cuc-357
trnae-cuc-356 mRNA upstream 3390 3277296 ~ 3277367 (+) True trnae-cuc-356
trnae-cuc-362 mRNA downstream 110 3280938 ~ 3281009 (+) True trnae-cuc-362
trnae-cuc-363 mRNA downstream 1118 3281946 ~ 3282017 (+) True trnae-cuc-363
trnae-cuc-364 mRNA downstream 2116 3282944 ~ 3283015 (+) True trnae-cuc-364
trnae-cuc-365 mRNA downstream 3155 3283983 ~ 3284054 (+) True trnae-cuc-365
trnae-cuc-366 mRNA downstream 3336 3284164 ~ 3284235 (+) True trnae-cuc-366
TU1812930 other upstream 209114 3032519 ~ 3071643 (+) False LOC110517772
TU1812241 other upstream 389951 2889284 ~ 2890806 (+) False LOC118941397
TU1812242 other upstream 390029 2889026 ~ 2890728 (+) False LOC118941397
TU1812367 other upstream 465463 2813874 ~ 2815294 (+) False G1583215
TU1813281 other downstream 151888 3432716 ~ 3435612 (+) False LOC110534752
TU1813282 other downstream 151888 3432716 ~ 3435612 (+) True LOC110534752
TU1813330 other downstream 202818 3483646 ~ 3485420 (+) True LOC110497289
TU1813430 other downstream 337010 3617838 ~ 3622788 (+) False LOC110497294
TU1813447 other downstream 359821 3640649 ~ 3642876 (+) True G1583951