RNA id: TCONS_00004658



Basic Information


Item Value
RNA id TCONS_00004658
length 116
RNA type rRNA
GC content 0.58
exon number 1
gene id XLOC_002487
representative True

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 339912 ~ 340027 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CCTAACGGCACCCCTGCCCTGCAGTCCAAGAGCGctcactcactgaagctaagcagggctgaggctggtcagtatctggatggaaagcacatgggaacactaggctgctgttggca

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176750

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00005738 lncRNA downstream 30059 307849 ~ 309853 (-) True XLOC_002484
TCONS_00004649 lncRNA downstream 131326 207082 ~ 208586 (-) True XLOC_002481
TCONS_00005958 lncRNA downstream 159208 179863 ~ 180704 (-) True XLOC_002480
TCONS_00005957 lncRNA downstream 164350 167409 ~ 175562 (-) True XLOC_002479
TCONS_00005956 lncRNA downstream 169492 167409 ~ 170420 (-) False XLOC_002479
TCONS_00005739 lncRNA upstream 14066 354093 ~ 354657 (-) True XLOC_002488
TCONS_00005740 lncRNA upstream 16528 356555 ~ 358707 (-) True XLOC_002489
TCONS_00005959 lncRNA upstream 75970 415997 ~ 420862 (-) False XLOC_002491
TCONS_00005960 lncRNA upstream 75970 415997 ~ 420918 (-) False XLOC_002491
TCONS_00005961 lncRNA upstream 75970 415997 ~ 421109 (-) False XLOC_002491
TCONS_00004655 mRNA downstream 17143 311722 ~ 322769 (-) False XLOC_002485
TCONS_00004656 mRNA downstream 19759 311917 ~ 320153 (-) True XLOC_002485
TCONS_00004654 mRNA downstream 30018 304596 ~ 309894 (-) False XLOC_002484
TCONS_00004652 mRNA downstream 37085 284305 ~ 302827 (-) False XLOC_002483
TCONS_00004653 mRNA downstream 39912 284354 ~ 300000 (-) True XLOC_002483
TCONS_00004659 mRNA upstream 20210 360237 ~ 373575 (-) True XLOC_002490
TCONS_00004660 mRNA upstream 260137 600164 ~ 641609 (-) False XLOC_002493
TCONS_00004661 mRNA upstream 260398 600425 ~ 625441 (-) True XLOC_002493
TCONS_00004662 mRNA upstream 304547 644574 ~ 690170 (-) True XLOC_002494
TCONS_00004663 mRNA upstream 742934 1082961 ~ 1133162 (-) False XLOC_002496
TCONS_00004640 other downstream 263721 73450 ~ 76191 (-) True XLOC_002475
TCONS_00004639 other downstream 265522 72433 ~ 74390 (-) False XLOC_002475
TCONS_00004703 other upstream 2526693 2866720 ~ 2875735 (-) False XLOC_002517
TCONS_00004704 other upstream 2528451 2868478 ~ 2875735 (-) True XLOC_002517
TCONS_00004722 other upstream 3166513 3506540 ~ 3506654 (-) True XLOC_002529
TCONS_00004723 other upstream 3428624 3768651 ~ 3768766 (-) True XLOC_002530
TCONS_00004736 other upstream 4678531 5018558 ~ 5020500 (-) False XLOC_002543