RNA id: TCONS_00004659


Basic Information

Item Value
RNA id TCONS_00004659
length 1260
RNA type mRNA
GC content 0.57
exon number 11
gene id XLOC_002490
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 360237 ~ 373575 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGTCCAGGGGCCCTGGGCCCTCAGGGGCAGCCCATCTACAGGATCGGGAGCCCGGCGCTGGGGGTCTGGCCGAGGGTCCGGTGGGCCTGCAGACGCTGCTGGATCTGCTGGTGGGAGTTTATCAGGAGTTCTGCTCATCGCCGCTGCGCAGAGAGAAACACGTGCAGAGATTCCTGCAGTGGGCGGAGCCTCTGGTCAGACAGGTGAAGAAGACCCGAATCAGCAGAGAGGATTTCCACATCCTGAAGGTGATCGGCAGAGGGACGTTCAGCGAGGTGGCTCTGGCGCGCATGCGTAACACACAGCAGGTTTACGCTGTGAAGATCATGAATAAATGGGACATGCTGAAACGTGGagagatggcGTGTTATCAGGAGGAGCGAGAGGTTCTGCTAAAGGGGGACAGAAGGTGGATCACAGAGTTGCACTACGCCTTCCAGGATGATGATTACCTATACCTGGTCATGCATTATTATGTTGGCGGTGACCTGCTGACGCTGCTGAGTAAGTTTAATGACGGTCTGCCGGAGGAGATGGCGCAGTTTTACCTGGCGGAGATGGTGATGGCCATCGACTCCGTGCACCTGCTGGGATACGTCCACAGAGATATTAAACCTGACAATATCCTGCTGACGGCAGACGGCCACGCACGGCTCGGGGATTTCGGCTCATGTCTCCGGCTAGAAGATGATGGACTGGTGCACTCGGCGGTGGCGGTCGGGACTCCAGATTATCTGTCTCCAGAACTCCTGCGGGCGGTGGAGGCTGGTGGGGGATACGGATCTGACTGCGACTGGTGGGCTCTAGGCGTCTGCGCATATGAGATGCTGCTGGGAACCACACCGTTCTATGCAGAGTCCATCTCTGAGACCTACGCCAAAATCATTCACTTCAAGCTTATCTTAGAGCTTCCTCTTGTTGGTGTGCAGGTGTCTGAGCCGGCGCGTGCTCTGGTCTGCAAGCGCTCTGAGCGTCTGGGCTCTGGAGGATCTGCAGACTTCAGGAGTCATCCGTTCTTCAGTGGCCTAGACTGGAGCTCTCTGCATCTGCACCCTCCGCCGTACCGTCCAGACGTCTCCAACGCCACAGACACTTCAAACTTCGATGTGCTGGACGACTGCCTCAGTGAAACGGTACCACAGCCAgagacTCTGTCTGATGTGATGGAGCGAGCGCCGGTCGGGGTTCATCTGGCATTTGTGGGATACTCGTACACTGCCACCAGGTCAGTGATGCTTCATCTGCAGGCTTTATTTTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000114487

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005740 lncRNA downstream 1530 356555 ~ 358707 (-) True XLOC_002489
TCONS_00005739 lncRNA downstream 5580 354093 ~ 354657 (-) True XLOC_002488
TCONS_00005738 lncRNA downstream 50384 307849 ~ 309853 (-) True XLOC_002484
TCONS_00004649 lncRNA downstream 151651 207082 ~ 208586 (-) True XLOC_002481
TCONS_00005958 lncRNA downstream 179533 179863 ~ 180704 (-) True XLOC_002480
TCONS_00005959 lncRNA upstream 42422 415997 ~ 420862 (-) False XLOC_002491
TCONS_00005960 lncRNA upstream 42422 415997 ~ 420918 (-) False XLOC_002491
TCONS_00005961 lncRNA upstream 42422 415997 ~ 421109 (-) False XLOC_002491
TCONS_00005962 lncRNA upstream 42422 415997 ~ 421144 (-) False XLOC_002491
TCONS_00005963 lncRNA upstream 42422 415997 ~ 421413 (-) False XLOC_002491
TCONS_00004657 mRNA downstream 17673 323401 ~ 342564 (-) True XLOC_002486
TCONS_00004655 mRNA downstream 37468 311722 ~ 322769 (-) False XLOC_002485
TCONS_00004656 mRNA downstream 40084 311917 ~ 320153 (-) True XLOC_002485
TCONS_00004654 mRNA downstream 50343 304596 ~ 309894 (-) False XLOC_002484
TCONS_00004652 mRNA downstream 57410 284305 ~ 302827 (-) False XLOC_002483
TCONS_00004660 mRNA upstream 226589 600164 ~ 641609 (-) False XLOC_002493
TCONS_00004661 mRNA upstream 226850 600425 ~ 625441 (-) True XLOC_002493
TCONS_00004662 mRNA upstream 270999 644574 ~ 690170 (-) True XLOC_002494
TCONS_00004663 mRNA upstream 709386 1082961 ~ 1133162 (-) False XLOC_002496
TCONS_00004664 mRNA upstream 736228 1109803 ~ 1180314 (-) True XLOC_002496
TCONS_00004658 other downstream 20210 339912 ~ 340027 (-) True XLOC_002487
TCONS_00004640 other downstream 284046 73450 ~ 76191 (-) True XLOC_002475
TCONS_00004639 other downstream 285847 72433 ~ 74390 (-) False XLOC_002475
TCONS_00004703 other upstream 2493145 2866720 ~ 2875735 (-) False XLOC_002517
TCONS_00004704 other upstream 2494903 2868478 ~ 2875735 (-) True XLOC_002517
TCONS_00004722 other upstream 3132965 3506540 ~ 3506654 (-) True XLOC_002529
TCONS_00004723 other upstream 3395076 3768651 ~ 3768766 (-) True XLOC_002530
TCONS_00004736 other upstream 4644983 5018558 ~ 5020500 (-) False XLOC_002543

Expression Profile

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