Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036954372.1 |
| length | 4011 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 15 |
| gene id | LOC110498668 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 17645109 ~ 17681920 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K08228 | SLC43A1; MFS transporter, LAT3 family, solute carrier family 43, member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1828683 | lncRNA | upstream | 73672 | 17570709 ~ 17571437 (+) | True | si:dkey-9i23.6 |
| TU1826861 | lncRNA | upstream | 89851 | 17547801 ~ 17555258 (+) | True | G1595369 |
| TU1826860 | lncRNA | upstream | 91553 | 17547801 ~ 17553556 (+) | False | G1595369 |
| TU1826862 | lncRNA | upstream | 97752 | 17546834 ~ 17547357 (+) | True | G1595370 |
| TU1826854 | lncRNA | upstream | 107293 | 17537596 ~ 17537816 (+) | True | G1595363 |
| TU1828926 | lncRNA | downstream | 116603 | 17798523 ~ 17798801 (+) | True | G1597210 |
| TU1828929 | lncRNA | downstream | 119380 | 17801300 ~ 17801534 (+) | True | G1597213 |
| TU1828930 | lncRNA | downstream | 119978 | 17801898 ~ 17802156 (+) | True | G1597214 |
| TU1828931 | lncRNA | downstream | 120645 | 17802565 ~ 17802787 (+) | True | G1597215 |
| TU1828957 | lncRNA | downstream | 162087 | 17844007 ~ 17844295 (+) | True | G1597241 |
| XM_036954371.1 | mRNA | upstream | 495 | 17625425 ~ 17644614 (+) | False | LOC110497447 |
| XM_036954370.1 | mRNA | upstream | 495 | 17625624 ~ 17644614 (+) | True | LOC110497447 |
| XM_036953682.1 | mRNA | upstream | 21631 | 17621912 ~ 17623478 (+) | False | pold4 |
| NM_001160566.1 | mRNA | upstream | 21634 | 17621396 ~ 17623475 (+) | False | pold4 |
| XR_005037670.1 | mRNA | upstream | 66350 | 17573411 ~ 17578759 (+) | True | LOC118941461 |
| XM_021573553.2 | mRNA | downstream | 58514 | 17740434 ~ 17749766 (+) | True | LOC110497448 |
| XM_021573554.2 | mRNA | downstream | 124995 | 17806915 ~ 17843760 (+) | True | LOC110497449 |
| XM_036954375.1 | mRNA | downstream | 252396 | 17934316 ~ 17936334 (+) | True | LOC110497453 |
| XM_021573561.2 | mRNA | downstream | 255082 | 17937002 ~ 17941545 (+) | True | LOC110497454 |
| XM_021575221.2 | mRNA | downstream | 274587 | 17956507 ~ 17962121 (+) | True | LOC110498558 |
| TU1828713 | other | upstream | 21636 | 17621418 ~ 17623473 (+) | True | pold4 |
| TU1826358 | other | upstream | 871400 | 16765543 ~ 16773709 (+) | True | G1594955 |
| TU1826285 | other | upstream | 966987 | 16675609 ~ 16678122 (+) | False | G1594895 |
| TU1829026 | other | downstream | 325803 | 18007723 ~ 18017040 (+) | True | G1597295 |
| TU1829078 | other | downstream | 361491 | 18043411 ~ 18046661 (+) | False | G1597342 |
| TU1829079 | other | downstream | 361491 | 18043411 ~ 18104592 (+) | True | G1597342 |
| TU1830606 | other | downstream | 1350965 | 19032885 ~ 19033176 (+) | True | G1598786 |
| TU1830735 | other | downstream | 1644508 | 19326428 ~ 19328329 (+) | True | LOC110497472 |
