Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021573568.2 |
| length | 2450 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC110497458 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 18161097 ~ 18218659 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008502 | melatonin receptor activity | molecular_function |
| id | description |
|---|---|
| K04285 | MTNR1A; melatonin receptor type 1A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1829421 | lncRNA | upstream | 6376 | 18154468 ~ 18154721 (+) | True | G1597649 |
| TU1829406 | lncRNA | upstream | 21743 | 18139087 ~ 18139354 (+) | True | G1597634 |
| TU1829400 | lncRNA | upstream | 25702 | 18135176 ~ 18135395 (+) | True | G1597628 |
| TU1829398 | lncRNA | upstream | 27379 | 18133394 ~ 18133718 (+) | True | G1597626 |
| TU1829374 | lncRNA | upstream | 55153 | 18105611 ~ 18105944 (+) | True | G1597602 |
| TU1829518 | lncRNA | downstream | 12327 | 18230986 ~ 18231193 (+) | True | G1597734 |
| TU1829634 | lncRNA | downstream | 99693 | 18318352 ~ 18318610 (+) | True | G1597849 |
| TU1829749 | lncRNA | downstream | 239652 | 18458311 ~ 18458655 (+) | True | G1597962 |
| TU1829753 | lncRNA | downstream | 248629 | 18467288 ~ 18467511 (+) | True | G1597966 |
| TU1829767 | lncRNA | downstream | 273899 | 18492558 ~ 18493382 (+) | False | G1597976 |
| XM_021575221.2 | mRNA | upstream | 198976 | 17956507 ~ 17962121 (+) | True | LOC110498558 |
| XM_021573561.2 | mRNA | upstream | 219552 | 17937002 ~ 17941545 (+) | True | LOC110497454 |
| XM_036954375.1 | mRNA | upstream | 224763 | 17934316 ~ 17936334 (+) | True | LOC110497453 |
| XM_021573554.2 | mRNA | upstream | 317337 | 17806915 ~ 17843760 (+) | True | LOC110497449 |
| XM_021573553.2 | mRNA | upstream | 411331 | 17740434 ~ 17749766 (+) | True | LOC110497448 |
| XR_005037673.1 | mRNA | downstream | 584068 | 18802727 ~ 18815594 (+) | False | LOC118941462 |
| XR_005037674.1 | mRNA | downstream | 584068 | 18802727 ~ 18815594 (+) | True | LOC118941462 |
| XR_005037849.1 | mRNA | downstream | 619893 | 18838552 ~ 18838607 (+) | True | LOC118941552 |
| XM_036954396.1 | mRNA | downstream | 905050 | 19123709 ~ 19141362 (+) | True | LOC110497463 |
| XM_021573571.2 | mRNA | downstream | 924511 | 19143170 ~ 19147993 (+) | False | LOC110497461 |
| TU1829079 | other | upstream | 56505 | 18043411 ~ 18104592 (+) | True | G1597342 |
| TU1829078 | other | upstream | 114436 | 18043411 ~ 18046661 (+) | False | G1597342 |
| TU1829026 | other | upstream | 144057 | 18007723 ~ 18017040 (+) | True | G1597295 |
| TU1828713 | other | upstream | 537624 | 17621418 ~ 17623473 (+) | True | pold4 |
| TU1826358 | other | upstream | 1387388 | 16765543 ~ 16773709 (+) | True | G1594955 |
| TU1830606 | other | downstream | 814226 | 19032885 ~ 19033176 (+) | True | G1598786 |
| TU1830735 | other | downstream | 1107769 | 19326428 ~ 19328329 (+) | True | LOC110497472 |
| TU1830796 | other | downstream | 1113082 | 19331741 ~ 19332220 (+) | True | G1598960 |
| TU1830797 | other | downstream | 1114361 | 19333020 ~ 19333450 (+) | True | G1598961 |
| TU1831070 | other | downstream | 1173632 | 19392291 ~ 19418517 (+) | True | G1599186 |
