Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00048872 |
| length | 1275 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 3 |
| gene id | XLOC_024808 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007136.7 |
| NCBI id | CM002909.2 |
| chromosome length | 37502051 |
| location | 34274691 ~ 34284144 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-110411-253 | Predicted to enable acetylglucosaminyltransferase activity. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Orthologous to human GCNT3 (glucosaminyl (N-acetyl) transferase 3, mucin type). |
| ensembl_id | ENSDART00000188109 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00049419 | lncRNA | downstream | 266207 | 34007807 ~ 34008484 (-) | True | XLOC_024805 |
| TCONS_00049418 | lncRNA | downstream | 304626 | 33963179 ~ 33970065 (-) | True | XLOC_024804 |
| TCONS_00049417 | lncRNA | downstream | 322497 | 33939113 ~ 33952194 (-) | True | XLOC_024803 |
| TCONS_00049416 | lncRNA | downstream | 322527 | 33939113 ~ 33952164 (-) | False | XLOC_024803 |
| TCONS_00049415 | lncRNA | downstream | 512265 | 33753298 ~ 33762426 (-) | True | XLOC_024802 |
| TCONS_00049420 | lncRNA | upstream | 193953 | 34478097 ~ 34512102 (-) | False | XLOC_024809 |
| TCONS_00049421 | lncRNA | upstream | 357296 | 34641440 ~ 34643204 (-) | True | XLOC_024811 |
| TCONS_00049108 | lncRNA | upstream | 387924 | 34672068 ~ 34681696 (-) | False | XLOC_024813 |
| TCONS_00049422 | lncRNA | upstream | 649687 | 34933831 ~ 34938131 (-) | True | XLOC_024816 |
| TCONS_00048883 | lncRNA | upstream | 678519 | 34962663 ~ 34965071 (-) | False | XLOC_024817 |
| TCONS_00048870 | mRNA | downstream | 118539 | 34154171 ~ 34156152 (-) | True | XLOC_024806 |
| TCONS_00048869 | mRNA | downstream | 999025 | 33266586 ~ 33275666 (-) | True | XLOC_024800 |
| TCONS_00048868 | mRNA | downstream | 1386576 | 32886143 ~ 32888115 (-) | True | XLOC_024797 |
| TCONS_00048867 | mRNA | downstream | 1404897 | 32787363 ~ 32869794 (-) | True | XLOC_024796 |
| TCONS_00048866 | mRNA | downstream | 1522709 | 32746014 ~ 32751982 (-) | True | XLOC_024795 |
| TCONS_00048875 | mRNA | upstream | 203556 | 34487700 ~ 34512102 (-) | True | XLOC_024809 |
| TCONS_00048876 | mRNA | upstream | 339603 | 34623747 ~ 34632050 (-) | True | XLOC_024810 |
| TCONS_00048877 | mRNA | upstream | 378214 | 34662358 ~ 34670413 (-) | True | XLOC_024812 |
| TCONS_00048878 | mRNA | upstream | 396874 | 34681018 ~ 34723937 (-) | False | XLOC_024813 |
| TCONS_00048879 | mRNA | upstream | 411645 | 34695789 ~ 34723976 (-) | True | XLOC_024813 |
| TCONS_00048871 | other | downstream | 19418 | 34255145 ~ 34255273 (-) | True | XLOC_024807 |
| TCONS_00048855 | other | downstream | 2253696 | 32020881 ~ 32020995 (-) | True | XLOC_024789 |
| TCONS_00048850 | other | downstream | 2367107 | 31890273 ~ 31907584 (-) | False | XLOC_024787 |
| TCONS_00048845 | other | downstream | 2596498 | 31678079 ~ 31678193 (-) | True | XLOC_024783 |
| TCONS_00048836 | other | downstream | 2956563 | 31318012 ~ 31318128 (-) | True | XLOC_024776 |
| TCONS_00048891 | other | upstream | 807768 | 35091912 ~ 35095112 (-) | False | XLOC_024824 |
| TCONS_00048937 | other | upstream | 1674010 | 35958154 ~ 35963205 (-) | True | XLOC_024864 |
| TCONS_00048942 | other | upstream | 1774376 | 36058520 ~ 36058655 (-) | True | XLOC_024867 |
| TCONS_00048949 | other | upstream | 1970185 | 36254329 ~ 36263112 (-) | False | XLOC_024872 |
| TCONS_00048967 | other | upstream | 2676580 | 36960724 ~ 36975214 (-) | False | XLOC_024886 |
