RNA id: NM_001124715.2



Basic Information


Item Value
RNA id NM_001124715.2
length 1311
RNA type mRNA
GC content 0.53
exon number 8
gene id ckba
representative True

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 39550499 ~ 39561200 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GACTGCCTCCACCTAAGAACAGCCACAACCATGGAGAAAATCAATGATAAAATGGCTAAACTGACCATCAAGAGGCTGTCACCCGAGGAGGAGTTCCCTGACCTAAGCCAGCACAACAACCACATGGCCAAGGTCTTAACCCAGGACATGTACACCAAACTCCGAGACCGTGCCACCCCCAACGGCTTCACCATAGATGGTGTCATTCAGACGGGGATTGATAATCCTGGCCATCCCTTCATCATGACTGTGGGATGTGTGGCTGGAGATGAGGAGACGTACGAGGTCTTCAAGGAGCTGCTGGATCCCATCATTGAGGACAGACATGGAGGATACAAGCCTACAGACAAGCACAagactgacctcaacccagacaaCCTGAAGggtgGAGATGACCTGGACCCCAACTATGTCATTAGCTCCCGTGTCCGAACAGGCAGGAGCATCCGTGGGTTCTGCCTGCCCCCACACTGCAGCCGTGGAGAGCGAAGGGGTGTTGAGAAAATGTCAGTCGAAGCTCTGGACTCCCTGTCTGGTGACCTGAAGGGGAAGTACTATGCCCTGAAGAACATGACAGATGCTGAGCAGCAGCAGCTAATTGATGACCACTTTCTGTTTGACAAGCCTGTGTCTCCTCTGCTGCTGGCCTCTGGCATGGCCCGGGACTGGCCTGATGGCAGGGGTATCTGGCACAATGATACCAAGACCTTTCTGGTCTGGGTCAATGAGGAGGACCACCTGCGTGTCATCTCCATGCAGAAGGGTGGCAACATGAAGGAGGTGTTCAACCGTTTCTGCACTGGCCTCACAAAGATTGAAACCCTGTTTAAAGATAAGGGCACTTCATTCATGTGGAATGAGCACTTGGGCTACGTTCTCACCTGCCCATCCAACCTGGGCACAGGGCTACGTGCTGGAGTCCACGTCAAGATCCCCAACATGAGCAAGCATGCCAAATTTGAGGAAGTGCTCAAGAGGCTAAGGCTCCAGAAACGTGGAACCGGTGGGGTGGACACCGCAGCTGTGGGTGGCACCTTCGACATCTCCAACGCAGACCGCCTGGGCTTCTCTGAGGTGGAGCTGGTGCAAATGGTTGTGGACGGTGTCAAGCTGCTGGTTGAGATGGAGAAGAAGCTGGAGAAGGGACAGTCTATTGATGACCTCATGCCTGCCCAGAAGTGACACTCTTGATTGCCTCCCccttgtcatctgaatgacatccTGGAATGCACTCTGTAATAAACAGCACTTACTCTCTTACAAGACACTCTCATTGAAAGAGGACATCTGAAAATAAAAACTGTTTCTTCC

Function


GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004111 creatine kinase activity molecular_function

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

JBrowse2


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Neighbor


RNA id RNA type direction distance location representative gene id
TU1857312 lncRNA downstream 19218 39530860 ~ 39531284 (-) True G1623106
TU1857248 lncRNA downstream 30338 39518977 ~ 39520164 (-) False G1623061
TU1857218 lncRNA downstream 145851 39400240 ~ 39404651 (-) True G1623038
TU1857177 lncRNA downstream 179881 39367042 ~ 39370621 (-) True si:dkey-229e3.2
TU1857176 lncRNA downstream 180072 39367042 ~ 39370430 (-) False si:dkey-229e3.2
TU1857336 lncRNA upstream 13481 39574681 ~ 39575099 (-) True G1623130
TU1857335 lncRNA upstream 90531 39651731 ~ 39652207 (-) True G1623129
TU1857334 lncRNA upstream 93469 39654669 ~ 39656645 (-) True G1623128
TU1857379 lncRNA upstream 106355 39667555 ~ 39670662 (-) True G1623154
TU1857404 lncRNA upstream 114239 39675439 ~ 39675770 (-) True G1623175
XM_021574198.2 mRNA downstream 47202 39498620 ~ 39503300 (-) True si:dkey-196h17.9
XM_021574186.2 mRNA downstream 179871 39365258 ~ 39370631 (-) False si:dkey-229e3.2
XM_021574176.2 mRNA downstream 264735 39278696 ~ 39285767 (-) True LOC110497802
XM_021574177.2 mRNA downstream 268807 39278696 ~ 39281695 (-) False LOC110497802
XM_021575231.2 mRNA downstream 272068 39276243 ~ 39278434 (-) True LOC110498575
XM_021574229.2 mRNA upstream 29141 39590341 ~ 39599313 (-) False LOC110497819
XM_021574231.2 mRNA upstream 29141 39590341 ~ 39599313 (-) False LOC110497819
XM_036954780.1 mRNA upstream 29141 39590341 ~ 39599313 (-) False LOC110497819
XM_036954782.1 mRNA upstream 29141 39590341 ~ 39599314 (-) False LOC110497819
XM_036954778.1 mRNA upstream 29141 39590341 ~ 39599888 (-) False LOC110497819
TU1857216 other downstream 138718 39396068 ~ 39411784 (-) False G1623037
TU1857403 other upstream 114239 39675439 ~ 39681529 (-) False G1623175
TU1859108 other upstream 906144 40467344 ~ 40547622 (-) False LOC110497838
TU1859105 other upstream 907213 40468413 ~ 40529271 (-) False LOC110497838
TU1859107 other upstream 907213 40468413 ~ 40544096 (-) False LOC110497838
TU1859109 other upstream 907213 40468413 ~ 40529271 (-) False LOC110497838

Expression Profile


NM_001124715.2 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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NM_001124715.2 Expression in each Bioproject

Bar chart with 19 bars.
NM_001124715.2 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.