Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1868286 |
| length | 648 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC110498056 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 49200093 ~ 49218555 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1868272 | lncRNA | upstream | 51992 | 49163201 ~ 49163400 (+) | False | zgc:193593 |
| TU1868236 | lncRNA | upstream | 102754 | 49111942 ~ 49112638 (+) | True | G1632870 |
| TU1868142 | lncRNA | upstream | 267904 | 48947289 ~ 48947488 (+) | True | G1632778 |
| TU1868138 | lncRNA | upstream | 273404 | 48941749 ~ 48941988 (+) | True | G1632774 |
| TU1868136 | lncRNA | upstream | 277880 | 48937311 ~ 48937512 (+) | True | G1632772 |
| TU1868294 | lncRNA | downstream | 1435 | 49217917 ~ 49218117 (+) | True | LOC110498056 |
| TU1868393 | lncRNA | downstream | 110181 | 49326663 ~ 49369912 (+) | False | G1633019 |
| TU1868394 | lncRNA | downstream | 110181 | 49326663 ~ 49370871 (+) | True | G1633019 |
| TU1868449 | lncRNA | downstream | 188997 | 49405479 ~ 49407939 (+) | True | G1633072 |
| TU1868464 | lncRNA | downstream | 209829 | 49426311 ~ 49453984 (+) | True | G1633087 |
| XM_036954992.1 | mRNA | upstream | 22953 | 49171450 ~ 49192439 (+) | False | si:ch211-195o20.7 |
| XM_021574619.2 | mRNA | upstream | 22953 | 49171451 ~ 49192439 (+) | True | si:ch211-195o20.7 |
| XM_036953827.1 | mRNA | upstream | 47846 | 49160705 ~ 49167546 (+) | False | zgc:193593 |
| XM_021574617.2 | mRNA | upstream | 60390 | 49129670 ~ 49155002 (+) | False | LOC110498053 |
| XM_036954990.1 | mRNA | upstream | 60390 | 49129782 ~ 49155002 (+) | False | LOC110498053 |
| XM_021574629.2 | mRNA | downstream | 349374 | 49565856 ~ 49611711 (+) | False | LOC110498063 |
| XM_036954999.1 | mRNA | downstream | 538486 | 49754968 ~ 49926745 (+) | False | LOC110498066 |
| XM_036955001.1 | mRNA | downstream | 538486 | 49754968 ~ 49926745 (+) | False | LOC110498066 |
| XM_036954998.1 | mRNA | downstream | 538488 | 49754970 ~ 49926745 (+) | False | LOC110498066 |
| XM_036955002.1 | mRNA | downstream | 538940 | 49755422 ~ 49926745 (+) | False | LOC110498066 |
| TU1868248 | other | upstream | 36990 | 49163954 ~ 49178402 (+) | True | zgc:193593 |
| TU1868247 | other | upstream | 47839 | 49163954 ~ 49167553 (+) | False | zgc:193593 |
| TU1868002 | other | upstream | 514824 | 48699057 ~ 48700568 (+) | True | G1632650 |
| TU1867942 | other | upstream | 537237 | 48589625 ~ 48678155 (+) | True | LOC110498046 |
| TU1867715 | other | upstream | 635736 | 48578778 ~ 48579656 (+) | False | LOC110498372 |
| TU1869832 | other | downstream | 947357 | 50163839 ~ 50167386 (+) | False | LOC110498072 |
| TU1869885 | other | downstream | 1027137 | 50243619 ~ 50255252 (+) | True | LOC110498078 |
| TU1870554 | other | downstream | 1390904 | 50607386 ~ 50610479 (+) | True | G1634948 |
| TU1872309 | other | downstream | 3358451 | 52574933 ~ 52575617 (+) | False | hnrnpua |
| TU1872307 | other | downstream | 3358474 | 52574956 ~ 52575617 (+) | False | hnrnpua |
