RNA id: TCONS_00004688


Basic Information

Item Value
RNA id TCONS_00004688
length 1479
RNA type mRNA
GC content 0.54
exon number 14
gene id XLOC_002512
representative False

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 2499383 ~ 2527342 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGCAGCTCGCAGTTGTGCTCTCTGACCATGCGGGGCCGCTGTTCTGCAAAACGCCGTCACATAACGCAGTTGTTACAAGAAGAGATACAGCTGCTCAGGGAATCGGCAAGCCCAGTGTGTATCATGCTGTTGTGGTCATCTTTCTAGAGTTTTTCGCCTGGGGTCTCCTGACCACACCAATGCTCACGGTTCTGCATGAGACCTTCCCCACACACACCTTCTTAATAAATGGCCTGATTCAGGGGGTGAagGGTCTGCTGTCTTTTATGAGCGCTCCGTTAATTGGAGCTCTGTCAGACGTGTGGGGCAGACGCTCTTTTCTGCTGGTGACCGTCTTCTTCACTTGCGCTCCAATACCTCTGATGAGACTCAGTCCATGgtGGTATTTCGCCATGATATCAGTGTCTGGTGCGTTTTCTGTCACCTTCTCTGTGATCTTCGCTTACATCGCAGATGTGACAGACGAGCGGGAGAGGAGTACAGCCTACGGACTCGTTTCTGCGACGTTCGCAGCGAGTCTGGTCACCAGCCCGGCCATCGGCGCATATCTGTCAGCCAGTTATGGTGATAATCTGGTGGTGCTGGTGGCCACTCTCATCGCCCTGGCCGACATCTGCTTCATCCTGCTGGCTGTCCCAGAGTCGCTGCCAGACAAGATGAGGCTCAACACCTGGGGGGCTCCTATCTCTTGGGAACAAGCTGATCCCTTTGCAtcttTGCGTAAAGTTGGCCAGGACACAACAGTTCTGCTCATCTGCATCACCGTATTTCTGTCCTATCTGCCCGAGGCGGGTCAATACTCCAGCTTTTTCCTCTACTTGCGTCAGGTCATTAACTTCTCGCCCAAAACGATCGCGGTGTTCATCGGCGTGGTGGGAATCCTCTCCATCCTGGCGCAGACACTTTTTCTCACTCTGCTAATGAGGACCATCGGGAACAAAAACACAGTTCTTTTGGGTCTGGGTTTCCAGATTCTTCAACTGGCCTGGTACGGTTTGGGGTCCGAGCCGTGgaTGATGTGGGCGGCCGGTGCGGTGGCGGCCATGTCCAGCATAACATTCCCTGCAGTGAGTGCTTTAGTGTCACGCAGCGCAGATCCAGATAAACAAGGTCTGGTTCAGGGCATGATAACAGGTATCCGGGGGCTCTGTAATGGTCTCGGTCCTGCTTTGTACGGTTTCGTTTTCTTCCTCTTCAATGTGGAGCTGAACGCCCACAGAGGTACACGCACAAATGTCCCCTTATTAGGGCCTACTACAATCCCCGGCCCTCCGTTTCTCCTGGGCGCCTGTACGGTAGTGGTGGCGTTTATAGTGGCTCTCTTTATACCCGACCACTCGACGCCCCCATCGACACCCTGCCAAACCCGTAAAAACAGTCTGGCCGGAGCTCACACCAACACACCGCTGCCAGGGAGCGACGAAGATTTCGAGCCGCTGCTGGAGGACAGCACTGTTAATGAAACTGGGAATGTATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184168

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005976 lncRNA downstream 545924 1948097 ~ 1953459 (-) True XLOC_002510
TCONS_00005973 lncRNA downstream 758208 1678283 ~ 1741175 (-) True XLOC_002506
TCONS_00004699 lncRNA upstream 239532 2766874 ~ 2772037 (-) False XLOC_002516
TCONS_00005977 lncRNA upstream 370637 2897979 ~ 2899304 (-) True XLOC_002518
TCONS_00005978 lncRNA upstream 794795 3322137 ~ 3326631 (-) False XLOC_002525
TCONS_00004718 lncRNA upstream 885207 3412549 ~ 3416153 (-) True XLOC_002527
TCONS_00004721 lncRNA upstream 894839 3422181 ~ 3427358 (-) True XLOC_002528
TCONS_00004686 mRNA downstream 537453 1955475 ~ 1961930 (-) False XLOC_002511
TCONS_00004687 mRNA downstream 537807 1956338 ~ 1961576 (-) True XLOC_002511
TCONS_00004685 mRNA downstream 672158 1745749 ~ 1827225 (-) True XLOC_002509
TCONS_00004684 mRNA downstream 711007 1745475 ~ 1788376 (-) False XLOC_002509
TCONS_00004683 mRNA downstream 765446 1722125 ~ 1733937 (-) True XLOC_002508
TCONS_00004694 mRNA upstream 45819 2573161 ~ 2603801 (-) True XLOC_002513
TCONS_00004695 mRNA upstream 152737 2680079 ~ 2682198 (-) True XLOC_002514
TCONS_00004696 mRNA upstream 168122 2695464 ~ 2713240 (-) False XLOC_002515
TCONS_00004697 mRNA upstream 169522 2696864 ~ 2713228 (-) True XLOC_002515
TCONS_00004698 mRNA upstream 231884 2759226 ~ 2788792 (-) False XLOC_002516
TCONS_00004658 other downstream 2159356 339912 ~ 340027 (-) True XLOC_002487
TCONS_00004640 other downstream 2423192 73450 ~ 76191 (-) True XLOC_002475
TCONS_00004639 other downstream 2424993 72433 ~ 74390 (-) False XLOC_002475
TCONS_00004703 other upstream 339378 2866720 ~ 2875735 (-) False XLOC_002517
TCONS_00004704 other upstream 341136 2868478 ~ 2875735 (-) True XLOC_002517
TCONS_00004722 other upstream 979198 3506540 ~ 3506654 (-) True XLOC_002529
TCONS_00004723 other upstream 1241309 3768651 ~ 3768766 (-) True XLOC_002530
TCONS_00004736 other upstream 2491216 5018558 ~ 5020500 (-) False XLOC_002543

Expression Profile

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