RNA id: TCONS_00004690


Basic Information

Item Value
RNA id TCONS_00004690
length 1389
RNA type mRNA
GC content 0.53
exon number 13
gene id XLOC_002512
representative False

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 2499383 ~ 2527342 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aaatgtgctgaaaaatcttctctccctaAAACACAAATTCAGGGAATCGGCAAGCCCAGTGTGTATCATGCTGTTGTGGTCATCTTTCTAGAGTTTTTCGCCTGGGGTCTCCTGACCACACCAATGCTCACGGTTCTGCATGAGACCTTCCCCACACACACCTTCTTAATAAATGGCCTGATTCAGGGGGTGAagGGTCTGCTGTCTTTTATGAGCGCTCCGTTAATTGGAGCTCTGTCAGACGTGTGGGGCAGACGCTCTTTTCTGCTGGTGACCGTCTTCTTCACTTGCGCTCCAATACCTCTGATGAGACTCAGTCCATGgtGGTATTTCGCCATGATATCAGTGTCTGGTGCGTTTTCTGTCACCTTCTCTGTGATCTTCGCTTACATCGCAGATGTGACAGACGAGCGGGAGAGGAGTACAGCCTACGGACTCGTTTCTGCGACGTTCGCAGCGAGTCTGGTCACCAGCCCGGCCATCGGCGCATATCTGTCAGCCAGTTATGGTGATAATCTGGTGGTGCTGGTGGCCACTCTCATCGCCCTGGCCGACATCTGCTTCATCCTGCTGGCTGTCCCAGAGTCGCTGCCAGACAAGATGAGGCTCAACACCTGGGGGGCTCCTATCTCTTGGGAACAAGCTGATCCCTTTGCAtcttTGCGTAAAGTTGGCCAGGACACAACAGTTCTGCTCATCTGCATCACCGTATTTCTGTCCTATCTGCCCGAGGCGGGTCAATACTCCAGCTTTTTCCTCTACTTGCAAACAAGCAGTGGATTTCTTTCTACACTTTTTCTCACTCTGCTAATGAGGACCATCGGGAACAAAAACACAGTTCTTTTGGGTCTGGGTTTCCAGATTCTTCAACTGGCCTGGTACGGTTTGGGGTCCGAGCCGTGgaTGATGTGGGCGGCCGGTGCGGTGGCGGCCATGTCCAGCATAACATTCCCTGCAGTGAGTGCTTTAGTGTCACGCAGCGCAGATCCAGATAAACAAGGTCTGGTTCAGGGCATGATAACAGGTATCCGGGGGCTCTGTAATGGTCTCGGTCCTGCTTTGTACGGTTTCGTTTTCTTCCTCTTCAATGTGGAGCTGAGTGGGATCACCCCCATCCAGCCCGACTTCACTACAATCCCCGGCCCTCCGTTTCTCCTGGGCGCCTGTACGGTAGTGGTGGCGTTTATAGTGGCTCTCTTTATACCCGACCACTCGACGCCCCCATCGACACCCTGCCAAACCCGTAAAAACAGTCTGGCCGGAGCTCACACCAACACACCGCTGCCAGGGAGCGACGAAGATTTCGAGCCGCTGCTGGAGGACAGCACTGTgttggaggagagtccttaccaatggtggaggagttcaagacgggcgaccccggattaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000188642

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005976 lncRNA downstream 549549 1948097 ~ 1953459 (-) True XLOC_002510
TCONS_00005973 lncRNA downstream 761833 1678283 ~ 1741175 (-) True XLOC_002506
TCONS_00004699 lncRNA upstream 241957 2766874 ~ 2772037 (-) False XLOC_002516
TCONS_00005977 lncRNA upstream 373062 2897979 ~ 2899304 (-) True XLOC_002518
TCONS_00005978 lncRNA upstream 797220 3322137 ~ 3326631 (-) False XLOC_002525
TCONS_00004718 lncRNA upstream 887632 3412549 ~ 3416153 (-) True XLOC_002527
TCONS_00004721 lncRNA upstream 897264 3422181 ~ 3427358 (-) True XLOC_002528
TCONS_00004686 mRNA downstream 541078 1955475 ~ 1961930 (-) False XLOC_002511
TCONS_00004687 mRNA downstream 541432 1956338 ~ 1961576 (-) True XLOC_002511
TCONS_00004685 mRNA downstream 675783 1745749 ~ 1827225 (-) True XLOC_002509
TCONS_00004684 mRNA downstream 714632 1745475 ~ 1788376 (-) False XLOC_002509
TCONS_00004683 mRNA downstream 769071 1722125 ~ 1733937 (-) True XLOC_002508
TCONS_00004694 mRNA upstream 48244 2573161 ~ 2603801 (-) True XLOC_002513
TCONS_00004695 mRNA upstream 155162 2680079 ~ 2682198 (-) True XLOC_002514
TCONS_00004696 mRNA upstream 170547 2695464 ~ 2713240 (-) False XLOC_002515
TCONS_00004697 mRNA upstream 171947 2696864 ~ 2713228 (-) True XLOC_002515
TCONS_00004698 mRNA upstream 234309 2759226 ~ 2788792 (-) False XLOC_002516
TCONS_00004658 other downstream 2162981 339912 ~ 340027 (-) True XLOC_002487
TCONS_00004640 other downstream 2426817 73450 ~ 76191 (-) True XLOC_002475
TCONS_00004639 other downstream 2428618 72433 ~ 74390 (-) False XLOC_002475
TCONS_00004703 other upstream 341803 2866720 ~ 2875735 (-) False XLOC_002517
TCONS_00004704 other upstream 343561 2868478 ~ 2875735 (-) True XLOC_002517
TCONS_00004722 other upstream 981623 3506540 ~ 3506654 (-) True XLOC_002529
TCONS_00004723 other upstream 1243734 3768651 ~ 3768766 (-) True XLOC_002530
TCONS_00004736 other upstream 2493641 5018558 ~ 5020500 (-) False XLOC_002543

Expression Profile

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