RNA id: TU1850124



Basic Information


Item Value
RNA id TU1850124
length 213
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G1616631
representative True

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 34451200 ~ 34451412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATTTAAATGTAATAACTCGCTAACATGTCAAGAGTGTTTAAGGTGTATCTTAGTAACGTCTTGAGGAAGTTAGAGTTAAGTTTGAAGAGAGTAATATTAGCCCTGCTCGGTTGTAGCGAAGAATAGCATCGTACTGAGAGTAGCTGCCATTTTATGTCGATTGTGAATGAACATGTGCGTTGTTAATAAGATATTTTGCTGTGTTATTTGTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1849967 lncRNA downstream 99847 34351153 ~ 34351353 (-) True G1616478
TU1849716 lncRNA downstream 298077 34152809 ~ 34153123 (-) True G1616248
TU1849706 lncRNA downstream 313199 34136866 ~ 34138001 (-) True G1616238
TU1849701 lncRNA downstream 317137 34132906 ~ 34134063 (-) True G1616235
TU1849700 lncRNA downstream 318541 34131917 ~ 34132659 (-) True G1616234
TU1850156 lncRNA upstream 40995 34492407 ~ 34495222 (-) True G1616663
TU1850165 lncRNA upstream 47737 34499149 ~ 34499388 (-) True G1616672
TU1850231 lncRNA upstream 90689 34542101 ~ 34542373 (-) True G1616737
TU1850236 lncRNA upstream 95613 34547025 ~ 34547316 (-) True G1616742
TU1850240 lncRNA upstream 98873 34550285 ~ 34550530 (-) True G1616746
XM_036954690.1 mRNA downstream 369968 34076809 ~ 34081232 (-) True LOC110497713
XM_036954691.1 mRNA downstream 369981 34076809 ~ 34081219 (-) False LOC110497713
XM_021574011.2 mRNA downstream 370101 34076809 ~ 34081099 (-) False LOC110497713
XM_021574010.2 mRNA downstream 371331 34076809 ~ 34079869 (-) False LOC110497713
LOC110498334 mRNA downstream 417916 34025811 ~ 34033284 (-) False LOC110498334
XM_021574034.2 mRNA upstream 413434 34864846 ~ 34919404 (-) True LOC110497721
XM_021574035.2 mRNA upstream 871330 35322742 ~ 35327947 (-) True LOC110497722
XM_036954701.1 mRNA upstream 877381 35328793 ~ 35331351 (-) False LOC110497723
XM_036954699.1 mRNA upstream 877381 35328793 ~ 35331373 (-) False LOC110497723
XM_021574039.2 mRNA upstream 877381 35328793 ~ 35331400 (-) False LOC110497723
TU1849241 other downstream 971764 33478593 ~ 33479436 (-) True G1615810
TU1849224 other downstream 1037983 33412219 ~ 33413217 (-) True G1615793
TU1848792 other downstream 1675496 32771917 ~ 32775704 (-) True LOC110497688
TU1848746 other downstream 1793431 32650926 ~ 32657769 (-) True G1615357
TU1848607 other downstream 1989621 32458530 ~ 32461579 (-) True G1615240
TU1851431 other upstream 941448 35392860 ~ 35396783 (-) True LOC110498336
TU1852753 other upstream 1950142 36401554 ~ 36405336 (-) True G1619119
TU1853281 other upstream 2203111 36654523 ~ 36768699 (-) True LOC110497753
TU1856858 other upstream 4505612 38957024 ~ 38958974 (-) True G1622757
TU1857173 other upstream 4913845 39365257 ~ 39370266 (-) False si:dkey-229e3.2

Expression Profile