Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049638 |
| length | 1654 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 9 |
| gene id | XLOC_025113 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 12718100 ~ 12730554 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042738 | exogenous drug catabolic process | biological_process |
| GO:0006082 | organic acid metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006805 | xenobiotic metabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0008395 | steroid hydroxylase activity | molecular_function |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-091113-5 | Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. |
| ensembl_id | ENSDART00000162343 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052614 | lncRNA | upstream | 453642 | 12239692 ~ 12264458 (+) | True | XLOC_025107 |
| TCONS_00052613 | lncRNA | upstream | 636727 | 12076852 ~ 12081373 (+) | True | XLOC_025106 |
| TCONS_00052612 | lncRNA | upstream | 642965 | 12074888 ~ 12075135 (+) | True | XLOC_025105 |
| TCONS_00052610 | lncRNA | upstream | 859297 | 11855320 ~ 11858803 (+) | False | XLOC_025103 |
| TCONS_00052615 | lncRNA | downstream | 108140 | 12838694 ~ 12854479 (+) | False | XLOC_025122 |
| TCONS_00052616 | lncRNA | downstream | 108471 | 12839025 ~ 12842930 (+) | True | XLOC_025122 |
| TCONS_00049655 | lncRNA | downstream | 418996 | 13149550 ~ 13167328 (+) | True | XLOC_025125 |
| TCONS_00052617 | lncRNA | downstream | 630149 | 13360703 ~ 13367508 (+) | True | XLOC_025128 |
| TCONS_00052328 | lncRNA | downstream | 659308 | 13389862 ~ 13390838 (+) | False | XLOC_025129 |
| TCONS_00049637 | mRNA | upstream | 2668 | 12710350 ~ 12715432 (+) | True | XLOC_025112 |
| TCONS_00049636 | mRNA | upstream | 18195 | 12652244 ~ 12699905 (+) | True | XLOC_025111 |
| TCONS_00049635 | mRNA | upstream | 19808 | 12593558 ~ 12698292 (+) | False | XLOC_025111 |
| TCONS_00049634 | mRNA | upstream | 19808 | 12593558 ~ 12698292 (+) | False | XLOC_025111 |
| TCONS_00049633 | mRNA | upstream | 131487 | 12554801 ~ 12586613 (+) | True | XLOC_025110 |
| TCONS_00049641 | mRNA | downstream | 1828 | 12732382 ~ 12740310 (+) | True | XLOC_025114 |
| TCONS_00049642 | mRNA | downstream | 13529 | 12744083 ~ 12749198 (+) | False | XLOC_025115 |
| TCONS_00049643 | mRNA | downstream | 13538 | 12744092 ~ 12747108 (+) | False | XLOC_025115 |
| TCONS_00049644 | mRNA | downstream | 17484 | 12748038 ~ 12749182 (+) | True | XLOC_025115 |
| TCONS_00049645 | mRNA | downstream | 24981 | 12755535 ~ 12763119 (+) | True | XLOC_025116 |
| TCONS_00049628 | other | upstream | 771143 | 11943549 ~ 11946957 (+) | True | XLOC_025104 |
| TCONS_00049621 | other | upstream | 2554539 | 10152138 ~ 10163561 (+) | True | XLOC_025087 |
| TCONS_00049609 | other | upstream | 3676005 | 9041989 ~ 9042095 (+) | True | XLOC_025081 |
| TCONS_00049608 | other | upstream | 3676532 | 9041462 ~ 9041568 (+) | True | XLOC_025080 |
| TCONS_00049607 | other | upstream | 3677047 | 9040947 ~ 9041053 (+) | True | XLOC_025079 |
| TCONS_00049660 | other | downstream | 675672 | 13406226 ~ 13406323 (+) | True | XLOC_025130 |
| TCONS_00049661 | other | downstream | 675897 | 13406451 ~ 13406538 (+) | False | XLOC_025131 |
| TCONS_00049675 | other | downstream | 1117672 | 13848226 ~ 13857716 (+) | False | XLOC_025143 |
| TCONS_00049684 | other | downstream | 1514112 | 14244666 ~ 14244784 (+) | True | XLOC_025148 |
| TCONS_00049690 | other | downstream | 1668671 | 14399225 ~ 14399652 (+) | True | XLOC_025154 |
