Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1860739 |
| length | 272 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G1626084 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 42232130 ~ 42232401 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1860737 | lncRNA | downstream | 2565 | 42228358 ~ 42229565 (-) | True | G1626082 |
| TU1860726 | lncRNA | downstream | 16205 | 42215481 ~ 42215925 (-) | True | G1626075 |
| TU1860171 | lncRNA | downstream | 135797 | 42096103 ~ 42096333 (-) | True | G1625603 |
| TU1860169 | lncRNA | downstream | 138273 | 42093617 ~ 42093857 (-) | True | G1625601 |
| TU1860166 | lncRNA | downstream | 141572 | 42090110 ~ 42090558 (-) | True | G1625598 |
| TU1860751 | lncRNA | upstream | 18567 | 42250968 ~ 42251503 (-) | True | G1626096 |
| TU1860763 | lncRNA | upstream | 23764 | 42256165 ~ 42256668 (-) | True | G1626106 |
| TU1860764 | lncRNA | upstream | 24825 | 42257226 ~ 42257477 (-) | True | G1626107 |
| TU1860768 | lncRNA | upstream | 32170 | 42264571 ~ 42264782 (-) | True | G1626111 |
| TU1860769 | lncRNA | upstream | 33968 | 42266369 ~ 42266860 (-) | True | G1626112 |
| XM_021574345.2 | mRNA | downstream | 19111 | 42190271 ~ 42213019 (-) | True | LOC110497894 |
| XM_021574346.2 | mRNA | downstream | 32496 | 42190271 ~ 42199634 (-) | False | LOC110497894 |
| XM_036954849.1 | mRNA | downstream | 42633 | 42185201 ~ 42189497 (-) | True | LOC118941476 |
| XM_036954848.1 | mRNA | downstream | 42875 | 42185201 ~ 42189255 (-) | False | LOC118941476 |
| XR_005037739.1 | mRNA | downstream | 43204 | 42185201 ~ 42188926 (-) | False | LOC118941476 |
| XM_036954855.1 | mRNA | upstream | 86695 | 42319096 ~ 42339373 (-) | False | LOC110497897 |
| XM_036954854.1 | mRNA | upstream | 86695 | 42319096 ~ 42339822 (-) | False | LOC110497897 |
| XM_036954856.1 | mRNA | upstream | 87537 | 42319938 ~ 42339375 (-) | False | LOC110497897 |
| XR_005037740.1 | mRNA | upstream | 87892 | 42320293 ~ 42339375 (-) | False | LOC110497897 |
| NM_001124388.1 | mRNA | upstream | 118996 | 42351397 ~ 42383265 (-) | True | ngb1 |
| TU1859988 | other | downstream | 381697 | 41846255 ~ 41850433 (-) | True | G1625428 |
| TU1859580 | other | downstream | 1037371 | 41194433 ~ 41194759 (-) | True | G1625066 |
| TU1859566 | other | downstream | 1069718 | 41144107 ~ 41162412 (-) | True | LOC110497865 |
| TU1859437 | other | downstream | 1152031 | 41069763 ~ 41080099 (-) | True | LOC110497863 |
| TU1859319 | other | downstream | 1536369 | 40695475 ~ 40695761 (-) | False | LOC110498350 |
| TU1860762 | other | upstream | 22834 | 42255235 ~ 42255797 (-) | True | G1626105 |
| TU1860882 | other | upstream | 233424 | 42465825 ~ 42470702 (-) | False | LOC110498355 |
| TU1860906 | other | upstream | 408048 | 42640449 ~ 42641273 (-) | True | G1626232 |
| TU1861008 | other | upstream | 526893 | 42759294 ~ 42838434 (-) | True | G1626324 |
| TU1861812 | other | upstream | 1176326 | 43408727 ~ 43409109 (-) | True | G1627068 |
