RNA id: TU1861812



Basic Information


Item Value
RNA id TU1861812
length 383
RNA type TUCP
GC content 0.61
exon number 1
gene id G1627068
representative True

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43408727 ~ 43409109 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGTGGCTGGCTGTGGGTCTCCTCAGCAGGATGCTGTGTGTCTGGGTCTGGATGGAGAGGGTTCTGGGGTTGTTGTACAGTGTGAGGGTACTGAGGGTTCTGAGGTGTCTGGGGGTGCTCTGGATGGTGGGAGTGCTGTGGGAGCTCTTGGGGGTGCTGTGGATGGTGGGGGTATTGTGGGATCTGTGGGGTCAGTGGGACGTGGGGCAGCTGCTGCGGGGGCTGAGCTGGCTGCTGGGGCAGTTGGGGGTCACTAGGGTTCTGGGCCTCCCAGGAAACAACTGTCCTCCTCAGCTCCTCTTCCTCCAGCTGTCTCAGGGAGATCTGCACATCGGAGCGCGAGTATGTGTAGCCGTGGCCAGCGGGACAGATCTCCTTGAAATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1861761 lncRNA downstream 88519 43306680 ~ 43320208 (-) True G1627022
TU1861764 lncRNA downstream 98256 43309259 ~ 43310471 (-) True G1627024
TU1861696 lncRNA downstream 195972 43187025 ~ 43212755 (-) True G1626961
TU1861693 lncRNA downstream 198109 43209216 ~ 43210618 (-) True G1626958
TU1861695 lncRNA downstream 199969 43207703 ~ 43208758 (-) True G1626960
TU1861814 lncRNA upstream 3919 43413028 ~ 43413229 (-) True G1627070
TU1861818 lncRNA upstream 7047 43416156 ~ 43416403 (-) True G1627074
TU1861819 lncRNA upstream 10564 43419673 ~ 43420118 (-) True G1627075
TU1861820 lncRNA upstream 11011 43420120 ~ 43420459 (-) True G1627076
TU1861835 lncRNA upstream 25858 43434967 ~ 43435467 (-) True G1627091
XM_021574406.2 mRNA downstream 233872 43171743 ~ 43174855 (-) True LOC110497930
XM_021574405.2 mRNA downstream 237279 43162498 ~ 43171448 (-) True LOC110497929
XM_021574404.2 mRNA downstream 237280 43162498 ~ 43171447 (-) False LOC110497929
XM_021574403.2 mRNA downstream 260263 43141522 ~ 43148464 (-) True LOC110497927
LOC110498359 mRNA downstream 269297 43136200 ~ 43139430 (-) True LOC110498359
XM_021574412.2 mRNA upstream 102859 43511968 ~ 43526477 (-) True LOC110497934
XM_021574413.2 mRNA upstream 148114 43557223 ~ 43578223 (-) False LOC110497935
XM_021574414.2 mRNA upstream 148114 43557223 ~ 43582363 (-) True LOC110497935
XM_036954886.1 mRNA upstream 330863 43739972 ~ 43805811 (-) False LOC110497940
XM_036954887.1 mRNA upstream 330863 43739972 ~ 43805811 (-) True LOC110497940
TU1861008 other downstream 570293 42759294 ~ 42838434 (-) True G1626324
TU1860906 other downstream 767454 42640449 ~ 42641273 (-) True G1626232
TU1860882 other downstream 938025 42465825 ~ 42470702 (-) False LOC110498355
TU1860762 other downstream 1152930 42255235 ~ 42255797 (-) True G1626105
TU1859988 other downstream 1558294 41846255 ~ 41850433 (-) True G1625428
TU1865759 other upstream 2594656 46003765 ~ 46005877 (-) False LOC110498001
TU1866141 other upstream 3210098 46619207 ~ 46629506 (-) False G1631005
TU1866265 other upstream 3421225 46830334 ~ 46830650 (-) True G1631120
TU1867475 other upstream 4507186 47916295 ~ 47980466 (-) False G1632192
TU1867520 other upstream 4559405 47968514 ~ 47970332 (-) True G1632228