Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1862338 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1627537 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 44088868 ~ 44089100 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1862241 | lncRNA | upstream | 146473 | 43941860 ~ 43942395 (+) | True | G1627446 |
| TU1862181 | lncRNA | upstream | 229218 | 43850806 ~ 43859650 (+) | True | G1627390 |
| TU1862180 | lncRNA | upstream | 238151 | 43850414 ~ 43850717 (+) | True | G1627389 |
| TU1862165 | lncRNA | upstream | 260663 | 43827975 ~ 43828205 (+) | True | G1627374 |
| TU1862161 | lncRNA | upstream | 269751 | 43818917 ~ 43819117 (+) | True | G1627370 |
| TU1862345 | lncRNA | downstream | 9853 | 44098953 ~ 44099167 (+) | True | G1627544 |
| TU1862659 | lncRNA | downstream | 33174 | 44122274 ~ 44122571 (+) | True | G1627818 |
| TU1862662 | lncRNA | downstream | 34491 | 44123591 ~ 44123869 (+) | True | G1627821 |
| TU1862663 | lncRNA | downstream | 36245 | 44125345 ~ 44125642 (+) | True | G1627822 |
| TU1862666 | lncRNA | downstream | 39915 | 44129015 ~ 44129467 (+) | True | G1627825 |
| XR_002469746.2 | mRNA | upstream | 142194 | 43944625 ~ 43946674 (+) | True | LOC110497948 |
| XM_021574434.2 | mRNA | upstream | 157496 | 43927072 ~ 43931372 (+) | False | LOC110497947 |
| XM_021574435.2 | mRNA | upstream | 157496 | 43927072 ~ 43931372 (+) | True | LOC110497947 |
| XM_036954885.1 | mRNA | upstream | 353460 | 43695222 ~ 43735408 (+) | False | LOC110498362 |
| XM_036954884.1 | mRNA | upstream | 353460 | 43697125 ~ 43735408 (+) | True | LOC110498362 |
| XM_021574439.2 | mRNA | downstream | 74932 | 44164032 ~ 44167404 (+) | False | zgc:194887 |
| XM_036954898.1 | mRNA | downstream | 74975 | 44164075 ~ 44167404 (+) | True | zgc:194887 |
| XM_036954902.1 | mRNA | downstream | 321149 | 44410249 ~ 44430245 (+) | True | LOC118941479 |
| XM_036954901.1 | mRNA | downstream | 351042 | 44440142 ~ 44491973 (+) | False | LOC110497955 |
| XR_005037748.1 | mRNA | downstream | 351055 | 44440155 ~ 44501752 (+) | False | LOC110497955 |
| TU1862108 | other | upstream | 272367 | 43814758 ~ 43816501 (+) | True | G1627319 |
| TU1862104 | other | upstream | 272567 | 43814726 ~ 43816301 (+) | False | G1627319 |
| TU1862103 | other | upstream | 272567 | 43814758 ~ 43816301 (+) | False | G1627319 |
| TU1861490 | other | upstream | 681741 | 43311840 ~ 43407127 (+) | True | LOC110497931 |
| TU1860306 | other | upstream | 1837297 | 42250731 ~ 42251571 (+) | True | G1625710 |
| TU1862932 | other | downstream | 325222 | 44414322 ~ 44448672 (+) | True | G1628073 |
| TU1863373 | other | downstream | 594262 | 44683362 ~ 44748925 (+) | True | G1628486 |
| TU1863375 | other | downstream | 599282 | 44688382 ~ 44747446 (+) | True | G1628488 |
| TU1863440 | other | downstream | 740822 | 44829922 ~ 44886234 (+) | True | G1628550 |
| TU1863586 | other | downstream | 797771 | 44886871 ~ 44887173 (+) | True | G1628689 |
