RNA id: TU1866926


Basic Information

Item Value
RNA id TU1866926
length 207
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G1631711
representative True

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47630005 ~ 47630211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gagatctaggggtctgaagatgtggggggttttatgacccctcacttccctggtaaatctcaggccaccgacaaattcctttgtcctgttactatggagaaccagcctcagaacattaaacatgaaataaagggactttggaacaatggtttctgtcagccacaatggtggtcatgacgatagatggaatatgaaaatgtatgtcat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1866925 lncRNA upstream 399 47629359 ~ 47629606 (+) True G1631710
TU1866924 lncRNA upstream 1255 47627900 ~ 47628750 (+) True G1631709
TU1866923 lncRNA upstream 3587 47626041 ~ 47626418 (+) True G1631708
TU1866921 lncRNA upstream 4737 47624994 ~ 47625268 (+) True G1631706
TU1866888 lncRNA upstream 33230 47594383 ~ 47596775 (+) True G1631679
TU1866927 lncRNA downstream 475 47630686 ~ 47630915 (+) True G1631712
TU1866970 lncRNA downstream 47131 47677342 ~ 47677943 (+) True G1631752
TU1867003 lncRNA downstream 67700 47697911 ~ 47698117 (+) True G1631785
TU1867004 lncRNA downstream 67941 47698152 ~ 47698366 (+) True G1631786
TU1867005 lncRNA downstream 69409 47699620 ~ 47699822 (+) True G1631787
XM_036954954.1 mRNA upstream 110351 47514824 ~ 47519654 (+) False LOC110498032
XM_021574576.2 mRNA upstream 110351 47514829 ~ 47519654 (+) True LOC110498032
XR_002469756.2 mRNA upstream 291786 47280667 ~ 47338219 (+) False LOC110498029
XM_036953826.1 mRNA downstream 134173 47764384 ~ 47765501 (+) True LOC118941362
XM_036954967.1 mRNA downstream 231652 47861863 ~ 47937951 (+) False LOC110498042
XM_036954968.1 mRNA downstream 231654 47861865 ~ 47918465 (+) False LOC110498042
XM_036954969.1 mRNA downstream 294517 47924728 ~ 47937951 (+) False LOC110498042
XM_036954970.1 mRNA downstream 295166 47925377 ~ 47937951 (+) True LOC110498042
TU1864963 other upstream 1370357 46257919 ~ 46259648 (+) False LOC110498004
TU1864938 other upstream 1404185 46225382 ~ 46225820 (+) True G1629912
TU1864795 other upstream 1613366 46013724 ~ 46016639 (+) True G1629779
TU1864159 other upstream 2113357 45516174 ~ 45516648 (+) True G1629210
TU1864149 other upstream 2127742 45501794 ~ 45502263 (+) True G1629200
TU1866913 other downstream 29915 47660126 ~ 47661235 (+) True G1631702
TU1867071 other downstream 117486 47747697 ~ 47749082 (+) True G1631844
TU1867254 other downstream 493737 48123948 ~ 48129380 (+) False LOC110498044
TU1867276 other downstream 493737 48123948 ~ 48129380 (+) False LOC110498044
TU1867715 other downstream 948567 48578778 ~ 48579656 (+) False LOC110498372

Expression Profile