RNA id: TU1869692


Basic Information

Item Value
RNA id TU1869692
length 213
lncRNA type intronic
GC content 0.43
exon number 1
gene id G1634188
representative True

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 49947978 ~ 49948190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TTCCTGCTCTTCCTGCTCTAACCAGTGGTGCACTCAGCCTTTGTTGAAGCTCCTATATGAAGGGATGTGAGTATATGAAAAGCTGGGCTCTGTAGTTGGATCCACATGCAGGGATTTTACAGAGTGAGTGAACAATAAACATTTCACGGGCTATGAAATCAGGTGGCTTTGTTTTTTGGCTGACATTTTCACAGAAACATGAGAAAGTAAGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1869688 lncRNA upstream 5366 49942277 ~ 49942612 (+) True G1634184
TU1869686 lncRNA upstream 7936 49939688 ~ 49940042 (+) True G1634182
TU1869682 lncRNA upstream 13281 49934478 ~ 49934697 (+) True G1634178
TU1869681 lncRNA upstream 13808 49933876 ~ 49934170 (+) True G1634177
TU1869679 lncRNA upstream 17106 49930489 ~ 49930872 (+) True G1634175
TU1869695 lncRNA downstream 7640 49955830 ~ 49956059 (+) True G1634191
TU1869696 lncRNA downstream 8436 49956626 ~ 49974932 (+) True G1634192
TU1869703 lncRNA downstream 15483 49963673 ~ 49994777 (+) True G1634198
TU1869793 lncRNA downstream 144377 50092567 ~ 50092905 (+) True G1634280
TU1869805 lncRNA downstream 159818 50108008 ~ 50108236 (+) True G1634292
XM_036955005.1 mRNA upstream 21233 49755423 ~ 49926745 (+) False LOC110498066
XM_021574636.2 mRNA downstream 89575 50037765 ~ 50068382 (+) False zgc:113142
XM_021574638.2 mRNA downstream 89575 50037765 ~ 50068382 (+) False zgc:113142
XM_036955012.1 mRNA downstream 89575 50037765 ~ 50068382 (+) False zgc:113142
XM_036955013.1 mRNA downstream 89575 50037765 ~ 50068382 (+) False zgc:113142
XM_036955014.1 mRNA downstream 91798 50039988 ~ 50068382 (+) True zgc:113142
TU1868248 other upstream 769576 49163954 ~ 49178402 (+) True zgc:193593
TU1868247 other upstream 780425 49163954 ~ 49167553 (+) False zgc:193593
TU1868002 other upstream 1247410 48699057 ~ 48700568 (+) True G1632650
TU1867942 other upstream 1269823 48589625 ~ 48678155 (+) True LOC110498046
TU1867715 other upstream 1368322 48578778 ~ 48579656 (+) False LOC110498372
TU1869832 other downstream 215649 50163839 ~ 50167386 (+) False LOC110498072
TU1869885 other downstream 295429 50243619 ~ 50255252 (+) True LOC110498078
TU1870554 other downstream 659196 50607386 ~ 50610479 (+) True G1634948
TU1872309 other downstream 2626743 52574933 ~ 52575617 (+) False hnrnpua
TU1872307 other downstream 2626766 52574956 ~ 52575617 (+) False hnrnpua

Expression Profile