Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049717 |
| length | 1349 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | XLOC_025171 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 15550522 ~ 15608166 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035264 | multicellular organism growth | biological_process |
| GO:0007420 | brain development | biological_process |
| id | description |
|---|---|
| ko04131 | Membrane trafficking |
| id | description |
|---|---|
| ZDB-GENE-090706-1 | Predicted to enable calcium ion binding activity and calcium-dependent phospholipid binding activity. Acts upstream of or within brain development. Is expressed in brain; female organism; and head. Orthologous to human DOC2A (double C2 domain alpha). |
| ensembl_id | ENSDART00000136912 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052332 | lncRNA | upstream | 32623 | 15517552 ~ 15517899 (+) | True | XLOC_025170 |
| TCONS_00049715 | lncRNA | upstream | 44365 | 15505184 ~ 15506157 (+) | False | XLOC_025169 |
| TCONS_00049716 | lncRNA | upstream | 44365 | 15505277 ~ 15506157 (+) | True | XLOC_025169 |
| TCONS_00052624 | lncRNA | upstream | 278229 | 15271946 ~ 15272293 (+) | False | XLOC_025165 |
| TCONS_00052623 | lncRNA | upstream | 318684 | 15229952 ~ 15231838 (+) | True | XLOC_025164 |
| TCONS_00052625 | lncRNA | downstream | 10112 | 15618278 ~ 15621754 (+) | True | XLOC_025172 |
| TCONS_00052626 | lncRNA | downstream | 31286 | 15639452 ~ 15646667 (+) | True | XLOC_025173 |
| TCONS_00052627 | lncRNA | downstream | 77196 | 15685362 ~ 15692587 (+) | False | XLOC_025174 |
| TCONS_00052628 | lncRNA | downstream | 77328 | 15685494 ~ 15692587 (+) | False | XLOC_025174 |
| TCONS_00052629 | lncRNA | downstream | 77589 | 15685755 ~ 15692587 (+) | False | XLOC_025174 |
| TCONS_00049714 | mRNA | upstream | 124833 | 15394428 ~ 15425689 (+) | True | XLOC_025168 |
| TCONS_00049711 | mRNA | upstream | 158056 | 15358459 ~ 15392466 (+) | False | XLOC_025167 |
| TCONS_00049713 | mRNA | upstream | 158078 | 15360879 ~ 15392444 (+) | True | XLOC_025167 |
| TCONS_00049712 | mRNA | upstream | 189144 | 15358625 ~ 15361378 (+) | False | XLOC_025167 |
| TCONS_00049710 | mRNA | upstream | 233130 | 15296824 ~ 15317392 (+) | True | XLOC_025166 |
| TCONS_00049720 | mRNA | downstream | 128645 | 15736811 ~ 15746999 (+) | True | XLOC_025175 |
| TCONS_00049722 | mRNA | downstream | 165825 | 15773991 ~ 15795396 (+) | False | XLOC_025176 |
| TCONS_00049723 | mRNA | downstream | 168280 | 15776446 ~ 15795110 (+) | True | XLOC_025176 |
| TCONS_00049724 | mRNA | downstream | 197751 | 15805917 ~ 15811037 (+) | False | XLOC_025177 |
| TCONS_00049725 | mRNA | downstream | 200932 | 15809098 ~ 15809943 (+) | True | XLOC_025177 |
| TCONS_00049704 | other | upstream | 865919 | 14674769 ~ 14684603 (+) | True | XLOC_025161 |
| TCONS_00049690 | other | upstream | 1150870 | 14399225 ~ 14399652 (+) | True | XLOC_025154 |
| TCONS_00049684 | other | upstream | 1305738 | 14244666 ~ 14244784 (+) | True | XLOC_025148 |
| TCONS_00049675 | other | upstream | 1692806 | 13848226 ~ 13857716 (+) | False | XLOC_025143 |
| TCONS_00049661 | other | upstream | 2143984 | 13406451 ~ 13406538 (+) | False | XLOC_025131 |
| TCONS_00049719 | other | downstream | 83137 | 15691303 ~ 15719823 (+) | True | XLOC_025174 |
| TCONS_00049721 | other | downstream | 147557 | 15755723 ~ 15774178 (+) | False | XLOC_025176 |
| TCONS_00049736 | other | downstream | 764846 | 16373012 ~ 16373127 (+) | True | XLOC_025188 |
| TCONS_00049741 | other | downstream | 961099 | 16569265 ~ 16588629 (+) | True | XLOC_025190 |
| TCONS_00049746 | other | downstream | 1060437 | 16668603 ~ 16678650 (+) | False | XLOC_025192 |
