Item | Value |
---|---|
RNA id | TU1877105 |
length | 202 |
lncRNA type | intronic |
GC content | 0.46 |
exon number | 1 |
gene id | G1640968 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048583.1 |
NCBI id | CM023237.2 |
chromosome length | 67237266 |
location | 56264759 ~ 56264960 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1877089 | lncRNA | upstream | 37353 | 56227153 ~ 56227406 (+) | True | G1640952 |
TU1877079 | lncRNA | upstream | 50073 | 56214210 ~ 56214686 (+) | True | G1640942 |
TU1877077 | lncRNA | upstream | 53145 | 56208706 ~ 56211614 (+) | True | G1640940 |
TU1877065 | lncRNA | upstream | 75396 | 56173493 ~ 56189363 (+) | True | G1640929 |
TU1877057 | lncRNA | upstream | 119261 | 56145276 ~ 56145498 (+) | True | G1640923 |
TU1877374 | lncRNA | downstream | 5085 | 56270045 ~ 56270297 (+) | True | G1641221 |
TU1877381 | lncRNA | downstream | 11181 | 56276141 ~ 56276502 (+) | True | G1641228 |
TU1877389 | lncRNA | downstream | 16121 | 56281081 ~ 56314320 (+) | True | LOC118941493 |
TU1877597 | lncRNA | downstream | 244969 | 56509929 ~ 56511097 (+) | False | G1641407 |
TU1877606 | lncRNA | downstream | 259259 | 56524219 ~ 56526253 (+) | True | G1641412 |
XM_036955122.1 | mRNA | upstream | 9975 | 56250613 ~ 56254784 (+) | True | LOC118941492 |
XM_021574766.2 | mRNA | upstream | 332680 | 55927603 ~ 55932079 (+) | False | LOC110498153 |
LOC110498388 | mRNA | upstream | 382057 | 55852116 ~ 55882702 (+) | True | LOC110498388 |
XM_036955113.1 | mRNA | upstream | 479038 | 55759844 ~ 55785721 (+) | False | kdm1a |
XM_036955123.1 | mRNA | downstream | 179563 | 56444523 ~ 56584678 (+) | False | LOC110498155 |
XM_036955124.1 | mRNA | downstream | 179563 | 56444523 ~ 56584678 (+) | False | LOC110498155 |
XM_036955126.1 | mRNA | downstream | 179563 | 56444523 ~ 56584678 (+) | False | LOC110498155 |
XM_036955125.1 | mRNA | downstream | 179564 | 56444524 ~ 56584678 (+) | True | LOC110498155 |
XR_005037772.1 | mRNA | downstream | 269110 | 56534070 ~ 56538629 (+) | False | LOC118941494 |
TU1876918 | other | upstream | 334464 | 55927648 ~ 55930295 (+) | True | LOC110498153 |
TU1875462 | other | upstream | 1295149 | 54968357 ~ 54969610 (+) | True | LOC110498128 |
TU1874741 | other | upstream | 2024008 | 54240256 ~ 54240751 (+) | False | G1638780 |
TU1874742 | other | upstream | 2024008 | 54240256 ~ 54240751 (+) | False | G1638780 |
TU1874669 | other | upstream | 2089629 | 54174796 ~ 54175130 (+) | True | G1638710 |
TU1877589 | other | downstream | 235197 | 56500157 ~ 56505897 (+) | True | G1641405 |
TU1877600 | other | downstream | 244969 | 56509929 ~ 56511097 (+) | False | G1641407 |
TU1877601 | other | downstream | 244969 | 56509929 ~ 56511097 (+) | True | G1641407 |
TU1877964 | other | downstream | 560992 | 56825952 ~ 56830309 (+) | True | G1641713 |
TU1878241 | other | downstream | 870866 | 57135826 ~ 57143925 (+) | True | G1641935 |