RNA id: TCONS_00004722


Basic Information

Item Value
RNA id TCONS_00004722
length 115
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_002529
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 3506540 ~ 3506654 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtcggcagctagctctctgcaactctcacatagtCGCCCATtaaagctaagcagagctgagcctggtcagtacatgGATGGCagactacatgggaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000187542

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00004721 lncRNA downstream 79182 3422181 ~ 3427358 (-) True XLOC_002528
TCONS_00004718 lncRNA downstream 90387 3412549 ~ 3416153 (-) True XLOC_002527
TCONS_00005978 lncRNA downstream 179909 3322137 ~ 3326631 (-) False XLOC_002525
TCONS_00005977 lncRNA downstream 607236 2897979 ~ 2899304 (-) True XLOC_002518
TCONS_00004699 lncRNA downstream 734503 2766874 ~ 2772037 (-) False XLOC_002516
TCONS_00005979 lncRNA upstream 447436 3954090 ~ 3956849 (-) True XLOC_002531
TCONS_00005744 lncRNA upstream 525824 4032478 ~ 4046317 (-) True XLOC_002532
TCONS_00005980 lncRNA upstream 531572 4038226 ~ 4040505 (-) True XLOC_002533
TCONS_00005981 lncRNA upstream 589217 4095871 ~ 4099183 (-) True XLOC_002534
TCONS_00005982 lncRNA upstream 1001735 4508389 ~ 4577852 (-) True XLOC_002537
TCONS_00004719 mRNA downstream 78910 3419832 ~ 3427630 (-) False XLOC_002528
TCONS_00004720 mRNA downstream 78951 3420488 ~ 3427589 (-) False XLOC_002528
TCONS_00004717 mRNA downstream 90282 3397871 ~ 3416258 (-) False XLOC_002527
TCONS_00004715 mRNA downstream 112250 3364650 ~ 3394290 (-) False XLOC_002526
TCONS_00004716 mRNA downstream 112284 3366103 ~ 3394256 (-) True XLOC_002526
TCONS_00004725 mRNA upstream 772867 4279521 ~ 4316015 (-) False XLOC_002535
TCONS_00004724 mRNA upstream 772867 4279521 ~ 4316015 (-) True XLOC_002535
TCONS_00004726 mRNA upstream 860776 4367430 ~ 4375190 (-) True XLOC_002536
TCONS_00004727 mRNA upstream 1434113 4940767 ~ 4961923 (-) False XLOC_002541
TCONS_00004728 mRNA upstream 1446698 4953352 ~ 4961929 (-) True XLOC_002541
TCONS_00004703 other downstream 630805 2866720 ~ 2875735 (-) False XLOC_002517
TCONS_00004704 other downstream 630805 2868478 ~ 2875735 (-) True XLOC_002517
TCONS_00004658 other downstream 3166513 339912 ~ 340027 (-) True XLOC_002487
TCONS_00004640 other downstream 3430349 73450 ~ 76191 (-) True XLOC_002475
TCONS_00004639 other downstream 3432150 72433 ~ 74390 (-) False XLOC_002475
TCONS_00004723 other upstream 261997 3768651 ~ 3768766 (-) True XLOC_002530
TCONS_00004736 other upstream 1511904 5018558 ~ 5020500 (-) False XLOC_002543
TCONS_00004737 other upstream 1513532 5020186 ~ 5022414 (-) False XLOC_002543
TCONS_00004738 other upstream 1513623 5020277 ~ 5024285 (-) True XLOC_002543
TCONS_00004756 other upstream 2443809 5950463 ~ 5950578 (-) True XLOC_002554