Item | Value |
---|---|
RNA id | TCONS_00049871 |
length | 622 |
lncRNA type | antisense |
GC content | 0.49 |
exon number | 1 |
gene id | XLOC_025257 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 20059678 ~ 20064732 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0022402 | cell cycle process | biological_process |
GO:0006259 | DNA metabolic process | biological_process |
GO:0006260 | DNA replication | biological_process |
GO:0006261 | DNA-dependent DNA replication | biological_process |
GO:0043596 | nuclear replication fork | cellular_component |
GO:0043601 | nuclear replisome | cellular_component |
GO:0005657 | replication fork | cellular_component |
GO:0005658 | alpha DNA polymerase | cellular_component |
GO:0030894 | replisome | cellular_component |
id | description |
---|---|
ko03050 | Proteasome |
ko03230 | Viral genome structure |
ko05164 | Influenza A |
ko03200 | Viral proteins |
ensembl_id | ENSDART00000162440 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00049864 | lncRNA | upstream | 386478 | 19665340 ~ 19677031 (+) | True | XLOC_025251 |
TCONS_00052334 | lncRNA | upstream | 590312 | 19472963 ~ 19473197 (+) | True | XLOC_025248 |
TCONS_00049856 | lncRNA | upstream | 702932 | 19355933 ~ 19360577 (+) | True | XLOC_025244 |
TCONS_00049852 | lncRNA | upstream | 722468 | 19336525 ~ 19341041 (+) | False | XLOC_025242 |
TCONS_00049829 | lncRNA | upstream | 1275024 | 18771528 ~ 18788485 (+) | True | XLOC_025229 |
TCONS_00052335 | lncRNA | downstream | 134172 | 20198302 ~ 20198619 (+) | True | XLOC_025259 |
TCONS_00052638 | lncRNA | downstream | 427072 | 20491202 ~ 20509513 (+) | True | XLOC_025261 |
TCONS_00049875 | lncRNA | downstream | 849180 | 20913310 ~ 20915154 (+) | True | XLOC_025263 |
TCONS_00052639 | lncRNA | downstream | 993724 | 21057854 ~ 21066838 (+) | True | XLOC_025265 |
TCONS_00052640 | lncRNA | downstream | 1072965 | 21137095 ~ 21143371 (+) | False | XLOC_025266 |
TCONS_00049870 | mRNA | upstream | 41913 | 20012891 ~ 20021596 (+) | True | XLOC_025256 |
TCONS_00049869 | mRNA | upstream | 51702 | 20001608 ~ 20011807 (+) | True | XLOC_025255 |
TCONS_00049868 | mRNA | upstream | 91735 | 19914332 ~ 19971774 (+) | True | XLOC_025254 |
TCONS_00049867 | mRNA | upstream | 249983 | 19732173 ~ 19813526 (+) | True | XLOC_025253 |
TCONS_00049866 | mRNA | upstream | 345575 | 19687217 ~ 19717934 (+) | True | XLOC_025252 |
TCONS_00049872 | mRNA | downstream | 92826 | 20156956 ~ 20231781 (+) | True | XLOC_025258 |
TCONS_00049873 | mRNA | downstream | 340782 | 20404912 ~ 20461702 (+) | True | XLOC_025260 |
TCONS_00049878 | mRNA | downstream | 1125636 | 21189766 ~ 21198744 (+) | False | XLOC_025267 |
TCONS_00049880 | mRNA | downstream | 1136633 | 21200763 ~ 21218133 (+) | True | XLOC_025268 |
TCONS_00049881 | mRNA | downstream | 1161620 | 21225750 ~ 21230668 (+) | True | XLOC_025269 |
TCONS_00049853 | other | upstream | 708571 | 19349438 ~ 19354938 (+) | True | XLOC_025242 |
TCONS_00049854 | other | upstream | 713692 | 19349719 ~ 19349817 (+) | True | XLOC_025243 |
TCONS_00049850 | other | upstream | 750402 | 19312991 ~ 19313107 (+) | True | XLOC_025241 |
TCONS_00049840 | other | upstream | 1096064 | 18936006 ~ 18967445 (+) | False | XLOC_025236 |
TCONS_00049874 | other | downstream | 615793 | 20679923 ~ 20680038 (+) | True | XLOC_025262 |
TCONS_00049876 | other | downstream | 961023 | 21025153 ~ 21030871 (+) | False | XLOC_025264 |
TCONS_00049877 | other | downstream | 961023 | 21025153 ~ 21030873 (+) | True | XLOC_025264 |
TCONS_00049893 | other | downstream | 1995183 | 22059313 ~ 22061088 (+) | False | XLOC_025275 |
TCONS_00049913 | other | downstream | 2504857 | 22568987 ~ 22569106 (+) | True | XLOC_025283 |