Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002469900.2 |
| length | 1391 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC110498958 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 11172527 ~ 11174543 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
11,169,600
11,170,000
11,170,400
11,170,800
11,171,200
11,171,600
11,172,000
11,172,400
11,172,800
11,173,200
11,173,600
11,174,000
11,174,400
11,174,800
11,175,200
11,175,600
11,176,000
11,176,400
11,176,800
11,177,200
11,177,600
NC_048584.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1903127 | lncRNA | downstream | 105395 | 11066933 ~ 11067132 (-) | True | G1663066 |
| TU1903072 | lncRNA | downstream | 144875 | 10944093 ~ 11027652 (-) | True | G1663012 |
| TU1902983 | lncRNA | downstream | 294591 | 10874539 ~ 10877936 (-) | True | zgc:112285 |
| TU1902926 | lncRNA | downstream | 305560 | 10834364 ~ 10866967 (-) | False | G1662896 |
| TU1903053 | lncRNA | upstream | 25022 | 11199565 ~ 11202116 (-) | True | G1662993 |
| TU1903188 | lncRNA | upstream | 63983 | 11238526 ~ 11255560 (-) | True | G1663122 |
| TU1903057 | lncRNA | upstream | 88652 | 11263195 ~ 11272155 (-) | True | LOC110511226 |
| TU1903055 | lncRNA | upstream | 89857 | 11264400 ~ 11269866 (-) | True | G1662995 |
| TU1903194 | lncRNA | upstream | 104203 | 11278746 ~ 11279092 (-) | True | G1663128 |
| XM_021575691.2 | mRNA | downstream | 2061 | 11152531 ~ 11170466 (-) | True | LOC110498951 |
| XM_021575693.2 | mRNA | downstream | 2064 | 11152531 ~ 11170463 (-) | False | LOC110498951 |
| XM_036955754.1 | mRNA | downstream | 2230 | 11152531 ~ 11170297 (-) | False | LOC110498951 |
| XM_036955755.1 | mRNA | downstream | 28290 | 11135515 ~ 11144237 (-) | True | LOC110498952 |
| XM_036955756.1 | mRNA | downstream | 28291 | 11135515 ~ 11144236 (-) | False | LOC110498952 |
| XR_002469898.2 | mRNA | upstream | 29374 | 11203917 ~ 11205489 (-) | True | LOC110498956 |
| XR_005037925.1 | mRNA | upstream | 71052 | 11245595 ~ 11246153 (-) | True | LOC118942034 |
| XR_005037927.1 | mRNA | upstream | 86606 | 11261149 ~ 11263141 (-) | True | LOC110498954 |
| XR_002471696.2 | mRNA | upstream | 96477 | 11271020 ~ 11272173 (-) | False | LOC110511226 |
| XM_036955757.1 | mRNA | upstream | 126245 | 11300788 ~ 11334422 (-) | False | LOC110498959 |
| TU1903036 | other | downstream | 13751 | 11122065 ~ 11158776 (-) | True | LOC110498953 |
| TU1903031 | other | downstream | 48816 | 11121913 ~ 11123711 (-) | False | LOC110498953 |
| TU1901981 | other | downstream | 695342 | 10476963 ~ 10477185 (-) | True | G1662039 |
| TU1900917 | other | downstream | 1712412 | 9422783 ~ 9460115 (-) | True | G1661001 |
| TU1900940 | other | downstream | 1771580 | 9399117 ~ 9400947 (-) | True | G1661023 |
| TU1903362 | other | upstream | 368073 | 11542616 ~ 11543091 (-) | True | G1663264 |
| TU1904421 | other | upstream | 1075607 | 12250150 ~ 12251106 (-) | False | G1664239 |
| TU1905723 | other | upstream | 2226738 | 13401281 ~ 13407377 (-) | True | G1665402 |
| TU1907060 | other | upstream | 3047656 | 14222199 ~ 14223019 (-) | True | G1666656 |
| TU1907198 | other | upstream | 3250430 | 14424973 ~ 14425314 (-) | True | G1666788 |
