Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005037927.1 |
| length | 394 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC110498954 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 11261149 ~ 11263141 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
11,260,000
11,260,400
11,260,800
11,261,200
11,261,600
11,262,000
11,262,400
11,262,800
11,263,200
11,263,600
11,264,000
11,264,000
11,264,400
11,264,800
11,265,200
11,265,600
11,266,000
11,266,400
11,266,800
11,267,200
11,267,600
11,268,000
NC_048584.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1903188 | lncRNA | downstream | 5589 | 11238526 ~ 11255560 (-) | True | G1663122 |
| TU1903053 | lncRNA | downstream | 59033 | 11199565 ~ 11202116 (-) | True | G1662993 |
| TU1903127 | lncRNA | downstream | 194017 | 11066933 ~ 11067132 (-) | True | G1663066 |
| TU1903072 | lncRNA | downstream | 233497 | 10944093 ~ 11027652 (-) | True | G1663012 |
| TU1902983 | lncRNA | downstream | 383213 | 10874539 ~ 10877936 (-) | True | zgc:112285 |
| TU1903057 | lncRNA | upstream | 54 | 11263195 ~ 11272155 (-) | True | LOC110511226 |
| TU1903055 | lncRNA | upstream | 1259 | 11264400 ~ 11269866 (-) | True | G1662995 |
| TU1903194 | lncRNA | upstream | 15605 | 11278746 ~ 11279092 (-) | True | G1663128 |
| TU1903244 | lncRNA | upstream | 82184 | 11345325 ~ 11346062 (-) | True | G1663159 |
| TU1903311 | lncRNA | upstream | 184706 | 11447847 ~ 11448067 (-) | True | G1663221 |
| XR_005037925.1 | mRNA | downstream | 14996 | 11245595 ~ 11246153 (-) | True | LOC118942034 |
| XR_002469898.2 | mRNA | downstream | 55660 | 11203917 ~ 11205489 (-) | True | LOC110498956 |
| XR_002469900.2 | mRNA | downstream | 86606 | 11172527 ~ 11174543 (-) | True | LOC110498958 |
| XM_021575691.2 | mRNA | downstream | 90683 | 11152531 ~ 11170466 (-) | True | LOC110498951 |
| XM_021575693.2 | mRNA | downstream | 90686 | 11152531 ~ 11170463 (-) | False | LOC110498951 |
| XR_002471696.2 | mRNA | upstream | 7879 | 11271020 ~ 11272173 (-) | False | LOC110511226 |
| XM_036955757.1 | mRNA | upstream | 37647 | 11300788 ~ 11334422 (-) | False | LOC110498959 |
| XM_036955758.1 | mRNA | upstream | 37647 | 11300788 ~ 11334588 (-) | False | LOC110498959 |
| XM_036955759.1 | mRNA | upstream | 40566 | 11303707 ~ 11334588 (-) | False | LOC110498959 |
| XM_036955760.1 | mRNA | upstream | 42703 | 11305844 ~ 11334588 (-) | True | LOC110498959 |
| TU1903036 | other | downstream | 102373 | 11122065 ~ 11158776 (-) | True | LOC110498953 |
| TU1903031 | other | downstream | 137438 | 11121913 ~ 11123711 (-) | False | LOC110498953 |
| TU1901981 | other | downstream | 783964 | 10476963 ~ 10477185 (-) | True | G1662039 |
| TU1900917 | other | downstream | 1801034 | 9422783 ~ 9460115 (-) | True | G1661001 |
| TU1900940 | other | downstream | 1860202 | 9399117 ~ 9400947 (-) | True | G1661023 |
| TU1903362 | other | upstream | 279475 | 11542616 ~ 11543091 (-) | True | G1663264 |
| TU1904421 | other | upstream | 987009 | 12250150 ~ 12251106 (-) | False | G1664239 |
| TU1905723 | other | upstream | 2138140 | 13401281 ~ 13407377 (-) | True | G1665402 |
| TU1907060 | other | upstream | 2959058 | 14222199 ~ 14223019 (-) | True | G1666656 |
| TU1907198 | other | upstream | 3161832 | 14424973 ~ 14425314 (-) | True | G1666788 |
