Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1915037 |
| length | 367 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | LOC110499590 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21972738 ~ 21974195 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1915010 | lncRNA | upstream | 1566 | 21968637 ~ 21971293 (+) | True | G1673783 |
| TU1915030 | lncRNA | upstream | 6657 | 21965934 ~ 21966202 (+) | True | G1673803 |
| TU1915025 | lncRNA | upstream | 17698 | 21949247 ~ 21955161 (+) | True | G1673798 |
| TU1915024 | lncRNA | upstream | 22838 | 21944028 ~ 21950021 (+) | True | G1673797 |
| TU1915005 | lncRNA | upstream | 70779 | 21901867 ~ 21902080 (+) | True | G1673778 |
| TU1915069 | lncRNA | downstream | 68941 | 22042443 ~ 22044388 (+) | True | G1673838 |
| TU1915073 | lncRNA | downstream | 75252 | 22048754 ~ 22050773 (+) | True | G1673841 |
| TU1915333 | lncRNA | downstream | 221477 | 22194979 ~ 22195354 (+) | True | G1674064 |
| TU1915334 | lncRNA | downstream | 222695 | 22196197 ~ 22196404 (+) | True | G1674065 |
| TU1915310 | lncRNA | downstream | 226616 | 22200118 ~ 22206985 (+) | False | G1674044 |
| XR_005037964.1 | mRNA | upstream | 13333 | 21945076 ~ 21959526 (+) | False | LOC110513322 |
| XR_005038416.1 | mRNA | upstream | 19724 | 21953008 ~ 21953135 (+) | True | LOC118942480 |
| XM_036955982.1 | mRNA | upstream | 25142 | 21936590 ~ 21947717 (+) | False | LOC110513322 |
| XM_036955984.1 | mRNA | downstream | 836 | 21974338 ~ 22091580 (+) | True | snx29 |
| XM_036955545.1 | mRNA | downstream | 278629 | 22252131 ~ 22318724 (+) | True | cpped1 |
| XM_036955992.1 | mRNA | downstream | 287245 | 22260747 ~ 22281843 (+) | False | LOC118942051 |
| XM_036955988.1 | mRNA | downstream | 306495 | 22279997 ~ 22281839 (+) | False | LOC118942051 |
| XM_036955985.1 | mRNA | downstream | 306495 | 22279997 ~ 22281843 (+) | False | LOC118942051 |
| TU1915004 | other | upstream | 13232 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 126993 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 159033 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914368 | other | upstream | 522513 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1916535 | other | downstream | 1283302 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1916709 | other | downstream | 1606528 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 1606635 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 1606635 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 1606635 | 23580137 ~ 23581387 (+) | True | faap100 |
