Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036955545.1 |
| length | 2652 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | cpped1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22252131 ~ 22318724 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1915310 | lncRNA | upstream | 45146 | 22200118 ~ 22206985 (+) | False | G1674044 |
| TU1915311 | lncRNA | upstream | 45146 | 22200118 ~ 22206985 (+) | True | G1674044 |
| TU1915334 | lncRNA | upstream | 55727 | 22196197 ~ 22196404 (+) | True | G1674065 |
| TU1915333 | lncRNA | upstream | 56777 | 22194979 ~ 22195354 (+) | True | G1674064 |
| TU1915073 | lncRNA | upstream | 201358 | 22048754 ~ 22050773 (+) | True | G1673841 |
| TU1915573 | lncRNA | downstream | 8641 | 22327365 ~ 22327568 (+) | True | G1674292 |
| TU1915604 | lncRNA | downstream | 69742 | 22388466 ~ 22391636 (+) | False | G1674319 |
| TU1915605 | lncRNA | downstream | 69742 | 22388466 ~ 22391636 (+) | False | G1674319 |
| TU1915606 | lncRNA | downstream | 69742 | 22388466 ~ 22391636 (+) | True | G1674319 |
| TU1915622 | lncRNA | downstream | 78296 | 22397020 ~ 22397239 (+) | True | G1674331 |
| XM_036955984.1 | mRNA | upstream | 160551 | 21974338 ~ 22091580 (+) | True | snx29 |
| XM_021576720.2 | mRNA | upstream | 277936 | 21972738 ~ 21974195 (+) | False | LOC110499590 |
| XR_005037964.1 | mRNA | upstream | 292605 | 21945076 ~ 21959526 (+) | False | LOC110513322 |
| XR_005038416.1 | mRNA | upstream | 298996 | 21953008 ~ 21953135 (+) | True | LOC118942480 |
| XR_005038415.1 | mRNA | upstream | 304606 | 21947398 ~ 21947525 (+) | True | LOC118942479 |
| XM_021576114.2 | mRNA | downstream | 22005 | 22340729 ~ 22347757 (+) | True | ercc4 |
| XM_021576115.2 | mRNA | downstream | 29193 | 22347917 ~ 22388445 (+) | True | mrtfba |
| XM_036955995.1 | mRNA | downstream | 142516 | 22461240 ~ 22465079 (+) | False | foxj1b |
| NM_001160522.2 | mRNA | downstream | 242725 | 22561449 ~ 22562880 (+) | True | zgc:163057 |
| XM_021576119.1 | mRNA | downstream | 253003 | 22571727 ~ 22572592 (+) | True | LOC110499167 |
| TU1915004 | other | upstream | 292504 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 406265 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 438305 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914368 | other | upstream | 801785 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1916535 | other | downstream | 938080 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1916709 | other | downstream | 1261306 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 1261413 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 1261413 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 1261413 | 23580137 ~ 23581387 (+) | True | faap100 |
