Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001160522.2 |
| length | 757 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | zgc:163057 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22561449 ~ 22562880 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0015671 | oxygen transport | biological_process |
| GO:0005833 | hemoglobin complex | cellular_component |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0019825 | oxygen binding | molecular_function |
| GO:0005344 | oxygen carrier activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1915748 | lncRNA | upstream | 4239 | 22556984 ~ 22557210 (+) | True | G1674446 |
| TU1915741 | lncRNA | upstream | 10678 | 22550501 ~ 22550771 (+) | True | G1674441 |
| TU1915734 | lncRNA | upstream | 20300 | 22540922 ~ 22541149 (+) | True | G1674434 |
| TU1915709 | lncRNA | upstream | 56323 | 22504123 ~ 22505126 (+) | True | G1674409 |
| TU1915701 | lncRNA | upstream | 64658 | 22496465 ~ 22496791 (+) | True | G1674404 |
| TU1915975 | lncRNA | downstream | 73777 | 22636657 ~ 22636891 (+) | True | G1674616 |
| TU1915977 | lncRNA | downstream | 76674 | 22639554 ~ 22639924 (+) | True | G1674618 |
| TU1915965 | lncRNA | downstream | 125246 | 22688126 ~ 22691716 (+) | False | arhgap17a |
| TU1915967 | lncRNA | downstream | 125246 | 22688126 ~ 22691716 (+) | False | arhgap17a |
| TU1915963 | lncRNA | downstream | 125453 | 22688333 ~ 22691716 (+) | False | arhgap17a |
| XM_036955995.1 | mRNA | upstream | 96370 | 22461240 ~ 22465079 (+) | False | foxj1b |
| XM_021576115.2 | mRNA | upstream | 173004 | 22347917 ~ 22388445 (+) | True | mrtfba |
| XM_021576114.2 | mRNA | upstream | 213692 | 22340729 ~ 22347757 (+) | True | ercc4 |
| XM_036955991.1 | mRNA | upstream | 279611 | 22280000 ~ 22281838 (+) | False | LOC118942051 |
| XM_021576119.1 | mRNA | downstream | 8847 | 22571727 ~ 22572592 (+) | True | LOC110499167 |
| XM_036955556.1 | mRNA | downstream | 11662 | 22574542 ~ 22575413 (+) | True | LOC110499592 |
| XM_036955557.1 | mRNA | downstream | 19936 | 22582816 ~ 22583667 (+) | True | LOC118942010 |
| XM_021576722.2 | mRNA | downstream | 28223 | 22591103 ~ 22591954 (+) | True | LOC110499593 |
| XM_021576120.2 | mRNA | downstream | 37606 | 22600486 ~ 22601541 (+) | True | LOC110499168 |
| TU1915004 | other | upstream | 601822 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 715583 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 747623 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914368 | other | upstream | 1111103 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1916535 | other | downstream | 693924 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1916709 | other | downstream | 1017150 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 1017257 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 1017257 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 1017257 | 23580137 ~ 23581387 (+) | True | faap100 |
