Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021576119.1 |
| length | 649 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC110499167 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22571727 ~ 22572592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0015671 | oxygen transport | biological_process |
| GO:0005833 | hemoglobin complex | cellular_component |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0019825 | oxygen binding | molecular_function |
| GO:0005344 | oxygen carrier activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1915748 | lncRNA | upstream | 14517 | 22556984 ~ 22557210 (+) | True | G1674446 |
| TU1915741 | lncRNA | upstream | 20956 | 22550501 ~ 22550771 (+) | True | G1674441 |
| TU1915734 | lncRNA | upstream | 30578 | 22540922 ~ 22541149 (+) | True | G1674434 |
| TU1915709 | lncRNA | upstream | 66601 | 22504123 ~ 22505126 (+) | True | G1674409 |
| TU1915701 | lncRNA | upstream | 74936 | 22496465 ~ 22496791 (+) | True | G1674404 |
| TU1915975 | lncRNA | downstream | 64065 | 22636657 ~ 22636891 (+) | True | G1674616 |
| TU1915977 | lncRNA | downstream | 66962 | 22639554 ~ 22639924 (+) | True | G1674618 |
| TU1915965 | lncRNA | downstream | 115534 | 22688126 ~ 22691716 (+) | False | arhgap17a |
| TU1915967 | lncRNA | downstream | 115534 | 22688126 ~ 22691716 (+) | False | arhgap17a |
| TU1915963 | lncRNA | downstream | 115741 | 22688333 ~ 22691716 (+) | False | arhgap17a |
| NM_001160522.2 | mRNA | upstream | 8847 | 22561449 ~ 22562880 (+) | True | zgc:163057 |
| XM_036955995.1 | mRNA | upstream | 106648 | 22461240 ~ 22465079 (+) | False | foxj1b |
| XM_021576115.2 | mRNA | upstream | 183282 | 22347917 ~ 22388445 (+) | True | mrtfba |
| XM_021576114.2 | mRNA | upstream | 223970 | 22340729 ~ 22347757 (+) | True | ercc4 |
| XM_036955989.1 | mRNA | upstream | 289890 | 22280001 ~ 22281837 (+) | False | LOC118942051 |
| XM_036955556.1 | mRNA | downstream | 1950 | 22574542 ~ 22575413 (+) | True | LOC110499592 |
| XM_036955557.1 | mRNA | downstream | 10224 | 22582816 ~ 22583667 (+) | True | LOC118942010 |
| XM_021576722.2 | mRNA | downstream | 18511 | 22591103 ~ 22591954 (+) | True | LOC110499593 |
| XM_021576120.2 | mRNA | downstream | 27894 | 22600486 ~ 22601541 (+) | True | LOC110499168 |
| XM_036956006.1 | mRNA | downstream | 69833 | 22642425 ~ 22690020 (+) | False | arhgap17a |
| TU1915004 | other | upstream | 612100 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 725861 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 757901 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914368 | other | upstream | 1121381 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1916535 | other | downstream | 684212 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1916709 | other | downstream | 1007438 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 1007545 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 1007545 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 1007545 | 23580137 ~ 23581387 (+) | True | faap100 |
