Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1916539 |
| length | 208 |
| lncRNA type | sense_over |
| GC content | 0.61 |
| exon number | 2 |
| gene id | LOC110499192 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 23252800 ~ 23269058 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1916424 | lncRNA | upstream | 140763 | 23115161 ~ 23117436 (+) | True | G1675016 |
| TU1916354 | lncRNA | upstream | 241452 | 23016200 ~ 23016747 (+) | True | G1674951 |
| TU1916349 | lncRNA | upstream | 247290 | 23009744 ~ 23010909 (+) | True | G1674946 |
| TU1916342 | lncRNA | upstream | 252507 | 23001585 ~ 23005692 (+) | True | G1674940 |
| TU1916313 | lncRNA | upstream | 288624 | 22969140 ~ 22969575 (+) | True | G1674912 |
| TU1916608 | lncRNA | downstream | 159638 | 23418135 ~ 23418386 (+) | True | G1675189 |
| TU1916610 | lncRNA | downstream | 162889 | 23421386 ~ 23421612 (+) | True | G1675191 |
| TU1916614 | lncRNA | downstream | 178848 | 23437345 ~ 23443412 (+) | True | G1675195 |
| TU1916630 | lncRNA | downstream | 200835 | 23459332 ~ 23463060 (+) | False | G1675209 |
| TU1916633 | lncRNA | downstream | 200835 | 23459332 ~ 23461445 (+) | False | G1675209 |
| XM_021576153.2 | mRNA | upstream | 6038 | 23203763 ~ 23252161 (+) | False | baiap2l1a |
| XM_021576154.2 | mRNA | upstream | 6038 | 23203763 ~ 23252161 (+) | False | baiap2l1a |
| XM_021576156.2 | mRNA | upstream | 6038 | 23203763 ~ 23252161 (+) | False | baiap2l1a |
| XM_021576157.2 | mRNA | upstream | 6038 | 23203763 ~ 23252161 (+) | True | baiap2l1a |
| XM_021576142.2 | mRNA | upstream | 319284 | 22918884 ~ 22938915 (+) | False | LOC110499185 |
| XM_021576166.2 | mRNA | downstream | 33534 | 23292031 ~ 23293827 (+) | True | LOC110499196 |
| XM_021576165.2 | mRNA | downstream | 36240 | 23294737 ~ 23297531 (+) | True | LOC110499195 |
| XM_021575354.2 | mRNA | downstream | 43196 | 23301693 ~ 23303981 (+) | False | pvalb2 |
| NM_001195411.1 | mRNA | downstream | 44083 | 23302580 ~ 23303604 (+) | True | pvalb2 |
| XM_021576167.2 | mRNA | downstream | 50451 | 23308948 ~ 23313989 (+) | False | pvalb9 |
| TU1916535 | other | upstream | 130 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1915004 | other | upstream | 1298572 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 1412333 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 1444373 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914368 | other | upstream | 1807853 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1916709 | other | downstream | 321533 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 321640 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 321640 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 321640 | 23580137 ~ 23581387 (+) | True | faap100 |
| TU1919058 | other | downstream | 1824167 | 25082664 ~ 25083277 (+) | True | G1677419 |
