Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021576169.2 |
| length | 1310 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | pvalb9 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 23308948 ~ 23313989 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1916539 | lncRNA | upstream | 50776 | 23258199 ~ 23258497 (+) | True | LOC110499192 |
| TU1916424 | lncRNA | upstream | 191837 | 23115161 ~ 23117436 (+) | True | G1675016 |
| TU1916354 | lncRNA | upstream | 292526 | 23016200 ~ 23016747 (+) | True | G1674951 |
| TU1916349 | lncRNA | upstream | 298364 | 23009744 ~ 23010909 (+) | True | G1674946 |
| TU1916342 | lncRNA | upstream | 303581 | 23001585 ~ 23005692 (+) | True | G1674940 |
| TU1916608 | lncRNA | downstream | 104146 | 23418135 ~ 23418386 (+) | True | G1675189 |
| TU1916610 | lncRNA | downstream | 107397 | 23421386 ~ 23421612 (+) | True | G1675191 |
| TU1916614 | lncRNA | downstream | 123356 | 23437345 ~ 23443412 (+) | True | G1675195 |
| TU1916630 | lncRNA | downstream | 145343 | 23459332 ~ 23463060 (+) | False | G1675209 |
| TU1916633 | lncRNA | downstream | 145343 | 23459332 ~ 23461445 (+) | False | G1675209 |
| XM_021575354.2 | mRNA | upstream | 5292 | 23301693 ~ 23303981 (+) | False | pvalb2 |
| NM_001195411.1 | mRNA | upstream | 5669 | 23302580 ~ 23303604 (+) | True | pvalb2 |
| XM_021576165.2 | mRNA | upstream | 11742 | 23294737 ~ 23297531 (+) | True | LOC110499195 |
| XM_021576166.2 | mRNA | upstream | 15446 | 23292031 ~ 23293827 (+) | True | LOC110499196 |
| XR_005037969.1 | mRNA | upstream | 40215 | 23252800 ~ 23269058 (+) | False | LOC110499192 |
| XM_036956024.1 | mRNA | downstream | 2879 | 23316868 ~ 23332111 (+) | False | ccz1 |
| XM_036956025.1 | mRNA | downstream | 2888 | 23316877 ~ 23332111 (+) | True | ccz1 |
| XM_036956026.1 | mRNA | downstream | 19432 | 23333421 ~ 23350557 (+) | False | dlgap5 |
| XM_036956027.1 | mRNA | downstream | 19432 | 23333421 ~ 23350557 (+) | True | dlgap5 |
| XM_036955546.1 | mRNA | downstream | 54004 | 23367993 ~ 23376296 (+) | True | eif2ak1 |
| TU1916535 | other | upstream | 51204 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1915004 | other | upstream | 1349646 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 1463407 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 1495447 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914369 | other | upstream | 1858927 | 21444883 ~ 21450346 (+) | True | G1673231 |
| TU1916709 | other | downstream | 266041 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 266148 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 266148 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 266148 | 23580137 ~ 23581387 (+) | True | faap100 |
| TU1919058 | other | downstream | 1768675 | 25082664 ~ 25083277 (+) | True | G1677419 |
