Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00052676 |
| length | 1333 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | XLOC_025382 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 26355294 ~ 26361798 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0043023 | ribosomal large subunit binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00050076 | lncRNA | upstream | 3831 | 26349655 ~ 26351463 (+) | True | XLOC_025381 |
| TCONS_00050070 | lncRNA | upstream | 51637 | 26295368 ~ 26303657 (+) | False | XLOC_025378 |
| TCONS_00050066 | lncRNA | upstream | 73733 | 26280487 ~ 26281561 (+) | True | XLOC_025377 |
| TCONS_00050064 | lncRNA | upstream | 94313 | 26260528 ~ 26260981 (+) | True | XLOC_025376 |
| TCONS_00050054 | lncRNA | upstream | 207861 | 26144765 ~ 26147433 (+) | False | XLOC_025372 |
| TCONS_00052677 | lncRNA | downstream | 49435 | 26411233 ~ 26416784 (+) | True | XLOC_025383 |
| TCONS_00052678 | lncRNA | downstream | 274022 | 26635820 ~ 26636398 (+) | True | XLOC_025384 |
| TCONS_00050078 | lncRNA | downstream | 380611 | 26742409 ~ 26743225 (+) | True | XLOC_025385 |
| TCONS_00050083 | lncRNA | downstream | 690392 | 27052190 ~ 27054349 (+) | True | XLOC_025388 |
| TCONS_00052679 | lncRNA | downstream | 932510 | 27294308 ~ 27340431 (+) | False | XLOC_025390 |
| TCONS_00050074 | mRNA | upstream | 3638 | 26345732 ~ 26351656 (+) | False | XLOC_025381 |
| TCONS_00050075 | mRNA | upstream | 3834 | 26346388 ~ 26351460 (+) | False | XLOC_025381 |
| TCONS_00050073 | mRNA | upstream | 11646 | 26342768 ~ 26343648 (+) | True | XLOC_025380 |
| TCONS_00050072 | mRNA | upstream | 28531 | 26322596 ~ 26326763 (+) | True | XLOC_025379 |
| TCONS_00050069 | mRNA | upstream | 35536 | 26294161 ~ 26319758 (+) | False | XLOC_025378 |
| TCONS_00050077 | mRNA | downstream | 372364 | 26734162 ~ 26751819 (+) | False | XLOC_025385 |
| TCONS_00050079 | mRNA | downstream | 451260 | 26813058 ~ 26814953 (+) | False | XLOC_025386 |
| TCONS_00050080 | mRNA | downstream | 452232 | 26814030 ~ 26814671 (+) | True | XLOC_025386 |
| TCONS_00050081 | mRNA | downstream | 543226 | 26905024 ~ 26906351 (+) | True | XLOC_025387 |
| TCONS_00050082 | mRNA | downstream | 665983 | 27027781 ~ 27056180 (+) | False | XLOC_025388 |
| TCONS_00050071 | other | upstream | 36240 | 26310494 ~ 26319054 (+) | True | XLOC_025378 |
| TCONS_00050060 | other | upstream | 160835 | 26194344 ~ 26194459 (+) | True | XLOC_025374 |
| TCONS_00050056 | other | upstream | 203734 | 26144765 ~ 26151560 (+) | False | XLOC_025372 |
| TCONS_00050021 | other | upstream | 1223063 | 25126456 ~ 25132231 (+) | True | XLOC_025346 |
| TCONS_00049977 | other | upstream | 2217386 | 24134557 ~ 24137908 (+) | True | XLOC_025318 |
| TCONS_00050085 | other | downstream | 709975 | 27071773 ~ 27074132 (+) | True | XLOC_025389 |
| TCONS_00050090 | other | downstream | 1045298 | 27407096 ~ 27407211 (+) | True | XLOC_025392 |
| TCONS_00050119 | other | downstream | 2469720 | 28831518 ~ 28850434 (+) | False | XLOC_025404 |
| TCONS_00050124 | other | downstream | 2499378 | 28861176 ~ 28866082 (+) | True | XLOC_025405 |
| TCONS_00050129 | other | downstream | 2805222 | 29167020 ~ 29167147 (+) | True | XLOC_025410 |
