Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1940489 |
| length | 645 |
| RNA type | TUCP |
| GC content | 0.56 |
| exon number | 2 |
| gene id | LOC110499564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43137388 ~ 43148369 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016042 | lipid catabolic process | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0004623 | phospholipase A2 activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1940632 | lncRNA | upstream | 2699 | 43134161 ~ 43134694 (+) | True | G1696542 |
| TU1940485 | lncRNA | upstream | 9393 | 43125707 ~ 43128000 (+) | False | G1696432 |
| TU1940486 | lncRNA | upstream | 9393 | 43125707 ~ 43128000 (+) | False | G1696432 |
| TU1940487 | lncRNA | upstream | 9393 | 43125707 ~ 43128000 (+) | True | G1696432 |
| TU1940492 | lncRNA | upstream | 11799 | 43120968 ~ 43125594 (+) | True | LOC110499502 |
| TU1940479 | lncRNA | downstream | 12489 | 43150604 ~ 43155908 (+) | True | G1696431 |
| TU1940646 | lncRNA | downstream | 19698 | 43157813 ~ 43158134 (+) | True | G1696549 |
| TU1940651 | lncRNA | downstream | 33348 | 43171463 ~ 43172287 (+) | True | G1696553 |
| TU1940652 | lncRNA | downstream | 34325 | 43172440 ~ 43172684 (+) | True | G1696554 |
| TU1940658 | lncRNA | downstream | 60294 | 43198409 ~ 43225842 (+) | True | G1696559 |
| XM_036956385.1 | mRNA | upstream | 15498 | 42950949 ~ 43121895 (+) | False | LOC110499502 |
| XM_036955561.1 | mRNA | upstream | 285654 | 42846046 ~ 42851739 (+) | True | tbxtb |
| XR_005038026.1 | mRNA | upstream | 310301 | 42803589 ~ 42827092 (+) | False | LOC118942075 |
| XM_036956384.1 | mRNA | upstream | 310301 | 42821797 ~ 42827092 (+) | False | LOC118942075 |
| XM_021576633.2 | mRNA | upstream | 363284 | 42745164 ~ 42774109 (+) | False | LOC110499501 |
| XM_036955569.1 | mRNA | downstream | 233578 | 43371693 ~ 43402764 (+) | True | LOC110510394 |
| XM_036955570.1 | mRNA | downstream | 310599 | 43448714 ~ 43494181 (+) | True | LOC118942021 |
| XM_036956406.1 | mRNA | downstream | 459972 | 43598087 ~ 43614283 (+) | False | LOC110499505 |
| XM_036956405.1 | mRNA | downstream | 459973 | 43598088 ~ 43615698 (+) | False | LOC110499505 |
| XM_021576651.2 | mRNA | downstream | 839165 | 43977280 ~ 43987101 (+) | True | LOC110499517 |
| TU1940630 | other | upstream | 3380 | 43133627 ~ 43134013 (+) | True | G1696541 |
| TU1940344 | other | upstream | 356844 | 42779999 ~ 42780549 (+) | True | G1696324 |
| TU1939722 | other | upstream | 610385 | 42522510 ~ 42527008 (+) | False | LOC118942073 |
| TU1939742 | other | upstream | 610756 | 42522559 ~ 42526637 (+) | False | LOC118942073 |
| TU1939686 | other | upstream | 626146 | 42509631 ~ 42511247 (+) | True | LOC110499605 |
| TU1940662 | other | downstream | 69444 | 43207559 ~ 43209518 (+) | True | G1696563 |
| TU1941117 | other | downstream | 485369 | 43623484 ~ 43626360 (+) | True | G1696904 |
| TU1941123 | other | downstream | 488273 | 43626388 ~ 43661355 (+) | True | G1696905 |
| TU1941142 | other | downstream | 531449 | 43669564 ~ 43670353 (+) | True | G1696916 |
| TU1941505 | other | downstream | 729114 | 43867229 ~ 43886750 (+) | False | G1697152 |
