RNA id: TCONS_00004755


Basic Information

Item Value
RNA id TCONS_00004755
length 831
RNA type mRNA
GC content 0.50
exon number 3
gene id XLOC_002553
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 5855259 ~ 5857548 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTTCCTCAGAGTGACAAACGAACGAGTACAGTGAACATTGATTTAACGACTTTAGCGACTTGTTTTTTATCTTAAATGGCAAATAACACGTCAGCTGCGTTTTTTAACCGAGTTAATACGATCACGACTGAGTTTGTCAACGAAAATCATCGAAGTGACACGATGGCTTCTCCTTCACCTTCTACCGTGATGAGAAGCCCAACAGAAAACACAGAGAAAAGGAGGAAAGGGAATAAAGCCTCTGCTTTCTTTAAGAGAGCATGGAAGGCTGTGAAGCGCCCTTTCCTTTGCTGTGACCGGAACAGAGTGGTTCCCTTTGAACCACGGTCAGATGTCGACGATTTCCAGCATCTGCCTGTTCCAGGTCCCTCCAGGACCGTCGCAGCACATGCAGACCTTGAGCCGGTGTGGCAGCCAGGCCAGGTCTGTGAAGATCTTCAGCCgttgagtgttccgggcccctTCAGCATTGAGCAAACAGCAGATGTGCCGAATGCAGATCCGGCCCGTCCAGAGTCCTCGACGGCCCTCACAGGTCATGTTGATACTGAGCTGGTGTGTCTGCCAGGCCAGGTCTGGGAAGATCCCCAGCCAATCAGTGTCCATGACCTCTCCAATATTAAGAACATGACGGATGCAGATTCGGCCTGTCCTGAGTCGCCTCCGTCTGTTCAAGACCCCTCTGATATTGATGGGACTGATGaaaaacccaagaaaggaaggaaaggcaAAAGAGTCTCTGCTTTCTTCAAGAGAGTATGGAAGGCTGCAACGCGCCCTTTCCTGTGCTGTGACACGGATGTAGTCCAGCATCTTACACCACAACCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000166933

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005990 lncRNA downstream 134 5854634 ~ 5855125 (-) True XLOC_002552
TCONS_00005989 lncRNA downstream 65108 5788620 ~ 5790151 (-) False XLOC_002550
TCONS_00004744 lncRNA downstream 327895 5525393 ~ 5527364 (-) True XLOC_002547
TCONS_00005988 lncRNA downstream 631317 5221915 ~ 5223942 (-) True XLOC_002546
TCONS_00005987 lncRNA downstream 632840 5221915 ~ 5222419 (-) False XLOC_002546
TCONS_00005991 lncRNA upstream 179333 6036881 ~ 6037746 (-) True XLOC_002555
TCONS_00005992 lncRNA upstream 531721 6389269 ~ 6409797 (-) True XLOC_002556
TCONS_00004764 lncRNA upstream 715390 6572938 ~ 6577465 (-) True XLOC_002560
TCONS_00005993 lncRNA upstream 752609 6610157 ~ 6611065 (-) True XLOC_002561
TCONS_00005994 lncRNA upstream 835966 6693514 ~ 6695332 (-) False XLOC_002565
TCONS_00004754 mRNA downstream 397 5852359 ~ 5854862 (-) False XLOC_002552
TCONS_00004753 mRNA downstream 7355 5824335 ~ 5847904 (-) True XLOC_002551
TCONS_00004751 mRNA downstream 7604 5823759 ~ 5847655 (-) False XLOC_002551
TCONS_00004752 mRNA downstream 10344 5824288 ~ 5844915 (-) False XLOC_002551
TCONS_00004749 mRNA downstream 33675 5788620 ~ 5821584 (-) False XLOC_002550
TCONS_00004757 mRNA upstream 559808 6417356 ~ 6427362 (-) False XLOC_002557
TCONS_00004758 mRNA upstream 559808 6417356 ~ 6454386 (-) False XLOC_002557
TCONS_00004761 mRNA upstream 615544 6473092 ~ 6494070 (-) True XLOC_002559
TCONS_00004762 mRNA upstream 663828 6521376 ~ 6588793 (-) False XLOC_002560
TCONS_00004763 mRNA upstream 665019 6522567 ~ 6587066 (-) False XLOC_002560
TCONS_00004738 other downstream 830974 5020277 ~ 5024285 (-) True XLOC_002543
TCONS_00004737 other downstream 832845 5020186 ~ 5022414 (-) False XLOC_002543
TCONS_00004736 other downstream 834759 5018558 ~ 5020500 (-) False XLOC_002543
TCONS_00004723 other downstream 2086493 3768651 ~ 3768766 (-) True XLOC_002530
TCONS_00004722 other downstream 2348605 3506540 ~ 3506654 (-) True XLOC_002529
TCONS_00004756 other upstream 92915 5950463 ~ 5950578 (-) True XLOC_002554
TCONS_00004759 other upstream 560157 6417705 ~ 6431288 (-) True XLOC_002557
TCONS_00004760 other upstream 615158 6472706 ~ 6472832 (-) True XLOC_002558
TCONS_00004765 other upstream 753527 6611075 ~ 6638235 (-) False XLOC_002562
TCONS_00004766 other upstream 765021 6622569 ~ 6623404 (-) False XLOC_002562

Expression Profile

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