Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1914530 |
| length | 300 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G1673369 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21676314 ~ 21682360 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1914494 | lncRNA | upstream | 52879 | 21623208 ~ 21623435 (+) | True | G1673334 |
| TU1914493 | lncRNA | upstream | 54633 | 21621451 ~ 21621681 (+) | True | G1673333 |
| TU1914393 | lncRNA | upstream | 139596 | 21478632 ~ 21536718 (+) | True | G1673251 |
| TU1914316 | lncRNA | upstream | 252859 | 21422216 ~ 21423455 (+) | False | LOC110499100 |
| TU1914315 | lncRNA | upstream | 253343 | 21422216 ~ 21422971 (+) | False | LOC110499100 |
| TU1914502 | lncRNA | downstream | 18711 | 21701071 ~ 21701804 (+) | True | G1673341 |
| TU1914601 | lncRNA | downstream | 122196 | 21804556 ~ 21804932 (+) | True | G1673434 |
| TU1914560 | lncRNA | downstream | 124549 | 21806909 ~ 21811368 (+) | False | tnrc6b |
| TU1914570 | lncRNA | downstream | 130592 | 21812952 ~ 21813178 (+) | False | tnrc6b |
| TU1914563 | lncRNA | downstream | 163596 | 21845956 ~ 21848439 (+) | True | tnrc6b |
| XM_021575990.2 | mRNA | upstream | 40279 | 21627905 ~ 21636035 (+) | False | csdc2a |
| XM_021575989.2 | mRNA | upstream | 40279 | 21627974 ~ 21636035 (+) | True | csdc2a |
| XM_021575991.2 | mRNA | upstream | 62083 | 21594881 ~ 21614231 (+) | True | LOC110499095 |
| XM_021575992.2 | mRNA | upstream | 89906 | 21573035 ~ 21586408 (+) | False | LOC110499096 |
| XM_021575984.2 | mRNA | downstream | 28151 | 21710511 ~ 21721556 (+) | False | cby1 |
| XM_021575985.2 | mRNA | downstream | 28932 | 21711292 ~ 21713888 (+) | False | cby1 |
| XM_036955972.1 | mRNA | downstream | 28932 | 21711292 ~ 21721556 (+) | False | cby1 |
| XM_036955974.1 | mRNA | downstream | 28966 | 21711326 ~ 21721556 (+) | False | cby1 |
| XM_036955973.1 | mRNA | downstream | 28985 | 21711345 ~ 21721556 (+) | True | cby1 |
| TU1914366 | other | upstream | 225968 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1914367 | other | upstream | 225968 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1914368 | other | upstream | 225968 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1914369 | other | upstream | 225968 | 21444883 ~ 21450346 (+) | True | G1673231 |
| TU1914311 | other | upstream | 238933 | 21423517 ~ 21437381 (+) | True | LOC110499100 |
| TU1914569 | other | downstream | 130885 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914567 | other | downstream | 151534 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1915004 | other | downstream | 254282 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1916535 | other | downstream | 1574444 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1916709 | other | downstream | 1897670 | 23580030 ~ 23581387 (+) | False | faap100 |
