RNA id: TU1914970



Basic Information


Item Value
RNA id TU1914970
length 247
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G1673751
representative True

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21853684 ~ 21853930 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccatttctccttgcaaaacagcttgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1914968 lncRNA upstream 394 21853080 ~ 21853290 (+) True G1673749
TU1914967 lncRNA upstream 664 21852812 ~ 21853020 (+) True G1673748
TU1914563 lncRNA upstream 5245 21845956 ~ 21848439 (+) True tnrc6b
TU1914570 lncRNA upstream 40506 21812952 ~ 21813178 (+) False tnrc6b
TU1914560 lncRNA upstream 42316 21806909 ~ 21811368 (+) False tnrc6b
TU1914978 lncRNA downstream 6006 21859936 ~ 21860156 (+) True G1673759
TU1914984 lncRNA downstream 9657 21863587 ~ 21863816 (+) True G1673765
TU1914985 lncRNA downstream 10553 21864483 ~ 21864682 (+) True G1673766
TU1914987 lncRNA downstream 11956 21865886 ~ 21866095 (+) True G1673768
TU1914999 lncRNA downstream 42835 21896765 ~ 21900182 (+) False G1673775
XM_036955975.1 mRNA upstream 5242 21806703 ~ 21848442 (+) False tnrc6b
XM_036955980.1 mRNA downstream 13904 21867834 ~ 21876459 (+) True LOC110499080
XM_021575967.2 mRNA downstream 22945 21876875 ~ 21894557 (+) False tmem184ba
XM_021575964.2 mRNA downstream 22984 21876914 ~ 21894557 (+) False tmem184ba
XM_021575965.2 mRNA downstream 22984 21876914 ~ 21894557 (+) False tmem184ba
XM_021575966.2 mRNA downstream 22984 21876914 ~ 21894557 (+) False tmem184ba
TU1914567 other upstream 7818 21833894 ~ 21845866 (+) False tnrc6b
TU1914569 other upstream 39858 21813245 ~ 21813826 (+) False tnrc6b
TU1914367 other upstream 403338 21444883 ~ 21450346 (+) False G1673231
TU1915004 other downstream 82712 21936642 ~ 21959627 (+) True LOC110513322
TU1916535 other downstream 1402874 23256804 ~ 23258069 (+) False LOC110499192
TU1916709 other downstream 1726100 23580030 ~ 23581387 (+) False faap100
TU1916707 other downstream 1726207 23580137 ~ 23581387 (+) False faap100
TU1916710 other downstream 1726207 23580137 ~ 23581432 (+) False faap100

Expression Profile