Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1915630 |
| length | 345 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1674339 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22405940 ~ 22406284 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1915624 | lncRNA | upstream | 5367 | 22400328 ~ 22400573 (+) | True | G1674333 |
| TU1915622 | lncRNA | upstream | 8701 | 22397020 ~ 22397239 (+) | True | G1674331 |
| TU1915604 | lncRNA | upstream | 14304 | 22388466 ~ 22391636 (+) | False | G1674319 |
| TU1915605 | lncRNA | upstream | 14304 | 22388466 ~ 22391636 (+) | False | G1674319 |
| TU1915606 | lncRNA | upstream | 14304 | 22388466 ~ 22391636 (+) | True | G1674319 |
| TU1915634 | lncRNA | downstream | 3705 | 22409989 ~ 22410212 (+) | True | G1674343 |
| TU1915611 | lncRNA | downstream | 8630 | 22414914 ~ 22416760 (+) | False | G1674321 |
| TU1915608 | lncRNA | downstream | 9778 | 22416062 ~ 22416760 (+) | False | G1674321 |
| TU1915610 | lncRNA | downstream | 9778 | 22416062 ~ 22418894 (+) | True | G1674321 |
| TU1915674 | lncRNA | downstream | 58024 | 22464308 ~ 22464838 (+) | True | foxj1b |
| XM_021576115.2 | mRNA | upstream | 17495 | 22347917 ~ 22388445 (+) | True | mrtfba |
| XM_021576114.2 | mRNA | upstream | 58183 | 22340729 ~ 22347757 (+) | True | ercc4 |
| XM_036955991.1 | mRNA | upstream | 124102 | 22280000 ~ 22281838 (+) | False | LOC118942051 |
| XM_036955995.1 | mRNA | downstream | 54956 | 22461240 ~ 22465079 (+) | False | foxj1b |
| NM_001160522.2 | mRNA | downstream | 155165 | 22561449 ~ 22562880 (+) | True | zgc:163057 |
| XM_021576119.1 | mRNA | downstream | 165443 | 22571727 ~ 22572592 (+) | True | LOC110499167 |
| XM_036955556.1 | mRNA | downstream | 168258 | 22574542 ~ 22575413 (+) | True | LOC110499592 |
| XM_036955557.1 | mRNA | downstream | 176532 | 22582816 ~ 22583667 (+) | True | LOC118942010 |
| TU1915004 | other | upstream | 446313 | 21936642 ~ 21959627 (+) | True | LOC110513322 |
| TU1914567 | other | upstream | 560074 | 21833894 ~ 21845866 (+) | False | tnrc6b |
| TU1914569 | other | upstream | 592114 | 21813245 ~ 21813826 (+) | False | tnrc6b |
| TU1914368 | other | upstream | 955594 | 21444883 ~ 21450346 (+) | False | G1673231 |
| TU1916535 | other | downstream | 850520 | 23256804 ~ 23258069 (+) | False | LOC110499192 |
| TU1916709 | other | downstream | 1173746 | 23580030 ~ 23581387 (+) | False | faap100 |
| TU1916707 | other | downstream | 1173853 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1916710 | other | downstream | 1173853 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916714 | other | downstream | 1173853 | 23580137 ~ 23581387 (+) | True | faap100 |
