Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00052724 |
| length | 769 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 9 |
| gene id | XLOC_025494 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 32671146 ~ 32680126 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0090263 | positive regulation of canonical Wnt signaling pathway | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| GO:0051092 | positive regulation of NF-kappaB transcription factor activity | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0061630 | ubiquitin protein ligase activity | molecular_function |
| id | description |
|---|---|
| ko04121 | Ubiquitin system |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052723 | lncRNA | upstream | 7447 | 32661766 ~ 32663743 (+) | False | XLOC_025493 |
| TCONS_00052722 | lncRNA | upstream | 14057 | 32651697 ~ 32657133 (+) | False | XLOC_025492 |
| TCONS_00050261 | lncRNA | upstream | 14057 | 32651697 ~ 32657133 (+) | False | XLOC_025492 |
| TCONS_00050263 | lncRNA | upstream | 15311 | 32651717 ~ 32655879 (+) | True | XLOC_025492 |
| TCONS_00052721 | lncRNA | upstream | 134812 | 32532912 ~ 32536378 (+) | False | XLOC_025485 |
| TCONS_00050272 | lncRNA | downstream | 10675 | 32685986 ~ 32686666 (+) | True | XLOC_025495 |
| TCONS_00050276 | lncRNA | downstream | 31829 | 32707140 ~ 32708110 (+) | True | XLOC_025497 |
| TCONS_00050281 | lncRNA | downstream | 74375 | 32749686 ~ 32772217 (+) | True | XLOC_025499 |
| TCONS_00052349 | lncRNA | downstream | 124651 | 32799962 ~ 32805375 (+) | True | XLOC_025500 |
| TCONS_00052725 | lncRNA | downstream | 301571 | 32976882 ~ 33029027 (+) | False | XLOC_025505 |
| TCONS_00050264 | mRNA | upstream | 1971 | 32661765 ~ 32669219 (+) | False | XLOC_025493 |
| TCONS_00050266 | mRNA | upstream | 4239 | 32663865 ~ 32666951 (+) | True | XLOC_025493 |
| TCONS_00050262 | mRNA | upstream | 12754 | 32651697 ~ 32658436 (+) | False | XLOC_025492 |
| TCONS_00050260 | mRNA | upstream | 20912 | 32631372 ~ 32650278 (+) | True | XLOC_025491 |
| TCONS_00050259 | mRNA | upstream | 41701 | 32620575 ~ 32629489 (+) | True | XLOC_025490 |
| TCONS_00050270 | mRNA | downstream | 5963 | 32681274 ~ 32688592 (+) | False | XLOC_025495 |
| TCONS_00050271 | mRNA | downstream | 5998 | 32681309 ~ 32689328 (+) | False | XLOC_025495 |
| TCONS_00050273 | mRNA | downstream | 14396 | 32689707 ~ 32696592 (+) | False | XLOC_025496 |
| TCONS_00050274 | mRNA | downstream | 15964 | 32691275 ~ 32695237 (+) | True | XLOC_025496 |
| TCONS_00050275 | mRNA | downstream | 23113 | 32698424 ~ 32711280 (+) | False | XLOC_025497 |
| TCONS_00050265 | other | upstream | 7444 | 32661991 ~ 32663746 (+) | False | XLOC_025493 |
| TCONS_00050254 | other | upstream | 99819 | 32571309 ~ 32571371 (+) | True | XLOC_025487 |
| TCONS_00050246 | other | upstream | 136064 | 32532596 ~ 32535126 (+) | False | XLOC_025485 |
| TCONS_00050194 | other | upstream | 882553 | 31788521 ~ 31788637 (+) | True | XLOC_025455 |
| TCONS_00050187 | other | upstream | 1067486 | 31600648 ~ 31603704 (+) | True | XLOC_025451 |
| TCONS_00050288 | other | downstream | 167483 | 32842794 ~ 32848026 (+) | False | XLOC_025502 |
| TCONS_00050297 | other | downstream | 370572 | 33045883 ~ 33048390 (+) | True | XLOC_025508 |
| TCONS_00050301 | other | downstream | 670036 | 33345347 ~ 33363031 (+) | False | XLOC_025512 |
| TCONS_00050303 | other | downstream | 670159 | 33345470 ~ 33378643 (+) | False | XLOC_025512 |
| TCONS_00050306 | other | downstream | 732277 | 33407588 ~ 33407710 (+) | True | XLOC_025514 |
