Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1920573 |
| length | 248 |
| lncRNA type | antisense_over |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G1678847 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 26228495 ~ 26228742 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1920563 | lncRNA | upstream | 12449 | 26215827 ~ 26216046 (+) | True | G1678837 |
| TU1920559 | lncRNA | upstream | 17347 | 26210904 ~ 26211148 (+) | True | G1678833 |
| TU1920558 | lncRNA | upstream | 18447 | 26209347 ~ 26210048 (+) | True | G1678832 |
| TU1920535 | lncRNA | upstream | 23713 | 26204473 ~ 26204782 (+) | True | G1678817 |
| TU1920523 | lncRNA | upstream | 46136 | 26181998 ~ 26182359 (+) | True | G1678805 |
| TU1920552 | lncRNA | downstream | 34627 | 26263369 ~ 26263816 (+) | False | sgca |
| TU1920554 | lncRNA | downstream | 43391 | 26272133 ~ 26272450 (+) | False | sgca |
| TU1920544 | lncRNA | downstream | 44015 | 26272757 ~ 26284003 (+) | False | sgca |
| TU1920537 | lncRNA | downstream | 47364 | 26276106 ~ 26284003 (+) | False | sgca |
| TU1920538 | lncRNA | downstream | 47364 | 26276106 ~ 26284385 (+) | False | sgca |
| XM_021576254.2 | mRNA | upstream | 177584 | 26003272 ~ 26050911 (+) | True | si:ch211-216b21.2 |
| XM_021576247.2 | mRNA | upstream | 835903 | 25364815 ~ 25392592 (+) | True | cdc42ep4b |
| XM_036956067.1 | mRNA | upstream | 874070 | 24892930 ~ 25354425 (+) | False | sdk2b |
| XM_021576255.2 | mRNA | downstream | 1403 | 26230145 ~ 26235558 (+) | False | LOC110499247 |
| XM_036956072.1 | mRNA | downstream | 1403 | 26230145 ~ 26235558 (+) | False | LOC110499247 |
| XM_021576257.2 | mRNA | downstream | 1404 | 26230146 ~ 26235558 (+) | True | LOC110499247 |
| XM_021576259.2 | mRNA | downstream | 34317 | 26263059 ~ 26274981 (+) | False | sgca |
| XM_021576260.2 | mRNA | downstream | 154763 | 26383505 ~ 26388284 (+) | True | tmem101 |
| TU1919386 | other | upstream | 586881 | 25636691 ~ 25641614 (+) | True | G1677738 |
| TU1919058 | other | upstream | 1145218 | 25082664 ~ 25083277 (+) | True | G1677419 |
| TU1916710 | other | upstream | 2647063 | 23580137 ~ 23581432 (+) | False | faap100 |
| TU1916707 | other | upstream | 2647108 | 23580137 ~ 23581387 (+) | False | faap100 |
| TU1920693 | other | downstream | 233452 | 26462194 ~ 26467953 (+) | True | G1678963 |
| TU1920824 | other | downstream | 403393 | 26632135 ~ 26633198 (+) | True | LOC110499256 |
| TU1920840 | other | downstream | 425885 | 26654627 ~ 26656111 (+) | True | LOC110499259 |
| TU1920883 | other | downstream | 471650 | 26700392 ~ 26775680 (+) | True | G1679135 |
| TU1921636 | other | downstream | 855684 | 27084426 ~ 27087463 (+) | True | G1679823 |
