RNA id: TCONS_00004760


Basic Information

Item Value
RNA id TCONS_00004760
length 127
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_002558
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 6472706 ~ 6472832 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tttcctcttaATATTGTGCCAGCAGTTAGTGCTCTTTAACTCTTACATGGTCgcacactgaagctaagcagagctgtgcctggtcagtacctggatgggagaccacatggtggttgctgccggaagt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120059

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005992 lncRNA downstream 62909 6389269 ~ 6409797 (-) True XLOC_002556
TCONS_00005991 lncRNA downstream 434960 6036881 ~ 6037746 (-) True XLOC_002555
TCONS_00005990 lncRNA downstream 617581 5854634 ~ 5855125 (-) True XLOC_002552
TCONS_00005989 lncRNA downstream 682555 5788620 ~ 5790151 (-) False XLOC_002550
TCONS_00004744 lncRNA downstream 945342 5525393 ~ 5527364 (-) True XLOC_002547
TCONS_00004764 lncRNA upstream 100106 6572938 ~ 6577465 (-) True XLOC_002560
TCONS_00005993 lncRNA upstream 137325 6610157 ~ 6611065 (-) True XLOC_002561
TCONS_00005994 lncRNA upstream 220682 6693514 ~ 6695332 (-) False XLOC_002565
TCONS_00004778 lncRNA upstream 313676 6786508 ~ 6831282 (-) True XLOC_002568
TCONS_00005995 lncRNA upstream 577493 7050325 ~ 7061537 (-) True XLOC_002571
TCONS_00004758 mRNA downstream 18320 6417356 ~ 6454386 (-) False XLOC_002557
TCONS_00004757 mRNA downstream 45344 6417356 ~ 6427362 (-) False XLOC_002557
TCONS_00004755 mRNA downstream 615158 5855259 ~ 5857548 (-) True XLOC_002553
TCONS_00004754 mRNA downstream 617844 5852359 ~ 5854862 (-) False XLOC_002552
TCONS_00004753 mRNA downstream 624802 5824335 ~ 5847904 (-) True XLOC_002551
TCONS_00004761 mRNA upstream 260 6473092 ~ 6494070 (-) True XLOC_002559
TCONS_00004762 mRNA upstream 48544 6521376 ~ 6588793 (-) False XLOC_002560
TCONS_00004763 mRNA upstream 49735 6522567 ~ 6587066 (-) False XLOC_002560
TCONS_00004772 mRNA upstream 292277 6765109 ~ 6775271 (-) True XLOC_002567
TCONS_00004773 mRNA upstream 308291 6781123 ~ 6867282 (-) False XLOC_002568
TCONS_00004759 other downstream 41418 6417705 ~ 6431288 (-) True XLOC_002557
TCONS_00004756 other downstream 522128 5950463 ~ 5950578 (-) True XLOC_002554
TCONS_00004738 other downstream 1448421 5020277 ~ 5024285 (-) True XLOC_002543
TCONS_00004737 other downstream 1450292 5020186 ~ 5022414 (-) False XLOC_002543
TCONS_00004736 other downstream 1452206 5018558 ~ 5020500 (-) False XLOC_002543
TCONS_00004765 other upstream 138243 6611075 ~ 6638235 (-) False XLOC_002562
TCONS_00004766 other upstream 149737 6622569 ~ 6623404 (-) False XLOC_002562
TCONS_00004767 other upstream 164898 6637730 ~ 6639167 (-) True XLOC_002562
TCONS_00004768 other upstream 188227 6661059 ~ 6662868 (-) True XLOC_002563
TCONS_00004769 other upstream 204841 6677673 ~ 6679486 (-) True XLOC_002564