Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1922544 |
| length | 412 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G1680647 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 27733349 ~ 27734096 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1922508 | lncRNA | upstream | 24891 | 27708232 ~ 27708458 (+) | True | G1680611 |
| TU1922301 | lncRNA | upstream | 40209 | 27688971 ~ 27693140 (+) | True | G1680423 |
| TU1922299 | lncRNA | upstream | 58069 | 27674929 ~ 27675280 (+) | True | G1680421 |
| TU1922298 | lncRNA | upstream | 58865 | 27674040 ~ 27674484 (+) | True | G1680420 |
| TU1922293 | lncRNA | upstream | 62092 | 27671021 ~ 27671257 (+) | True | G1680415 |
| TU1922592 | lncRNA | downstream | 33522 | 27767618 ~ 27768095 (+) | True | G1680694 |
| TU1922604 | lncRNA | downstream | 53439 | 27787535 ~ 27788023 (+) | True | G1680705 |
| TU1922610 | lncRNA | downstream | 60107 | 27794203 ~ 27794710 (+) | True | G1680711 |
| TU1922613 | lncRNA | downstream | 63907 | 27798003 ~ 27798398 (+) | True | G1680714 |
| TU1922623 | lncRNA | downstream | 71398 | 27805494 ~ 27808926 (+) | True | G1680722 |
| XM_021576325.2 | mRNA | upstream | 49442 | 27676593 ~ 27683907 (+) | True | LOC110499283 |
| XM_036956107.1 | mRNA | upstream | 106564 | 27610626 ~ 27626785 (+) | False | map3k21 |
| XM_036956110.1 | mRNA | downstream | 36646 | 27770742 ~ 27786519 (+) | False | LOC100136337 |
| XM_036956109.1 | mRNA | downstream | 37185 | 27771281 ~ 27786519 (+) | True | LOC100136337 |
| XM_021576338.2 | mRNA | downstream | 80293 | 27814389 ~ 27858095 (+) | False | arfgef3 |
| XM_021576329.2 | mRNA | downstream | 81121 | 27815217 ~ 27858095 (+) | False | arfgef3 |
| XM_021576330.2 | mRNA | downstream | 81121 | 27815217 ~ 27858095 (+) | False | arfgef3 |
| TU1922082 | other | upstream | 357530 | 27375354 ~ 27375819 (+) | True | G1680230 |
| TU1921636 | other | upstream | 645886 | 27084426 ~ 27087463 (+) | True | G1679823 |
| TU1920883 | other | upstream | 957669 | 26700392 ~ 26775680 (+) | True | G1679135 |
| TU1920840 | other | upstream | 1077238 | 26654627 ~ 26656111 (+) | True | LOC110499259 |
| TU1920824 | other | upstream | 1100151 | 26632135 ~ 26633198 (+) | True | LOC110499256 |
| TU1923119 | other | downstream | 983265 | 28717361 ~ 28726495 (+) | True | G1681180 |
| TU1923788 | other | downstream | 1043910 | 28778006 ~ 28778409 (+) | True | G1681792 |
| TU1924556 | other | downstream | 1723132 | 29457228 ~ 29457921 (+) | True | lhcgr |
| TU1924589 | other | downstream | 1838339 | 29572435 ~ 29576558 (+) | False | LOC110499316 |
| TU1924591 | other | downstream | 1840662 | 29574758 ~ 29576558 (+) | True | LOC110499316 |
