Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1922739 |
| length | 307 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1680826 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 28026511 ~ 28026817 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1922603 | lncRNA | upstream | 34455 | 27991571 ~ 27992056 (+) | True | G1680704 |
| TU1922692 | lncRNA | upstream | 88814 | 27937194 ~ 27937697 (+) | True | G1680780 |
| TU1922623 | lncRNA | upstream | 217585 | 27805494 ~ 27808926 (+) | True | G1680722 |
| TU1922613 | lncRNA | upstream | 228113 | 27798003 ~ 27798398 (+) | True | G1680714 |
| TU1922610 | lncRNA | upstream | 231801 | 27794203 ~ 27794710 (+) | True | G1680711 |
| TU1922791 | lncRNA | downstream | 71660 | 28098477 ~ 28099570 (+) | True | G1680874 |
| TU1922863 | lncRNA | downstream | 199178 | 28225995 ~ 28248967 (+) | True | cep170aa |
| TU1922886 | lncRNA | downstream | 228399 | 28255216 ~ 28255554 (+) | True | G1680964 |
| TU1922890 | lncRNA | downstream | 234278 | 28261095 ~ 28261302 (+) | True | G1680968 |
| TU1922891 | lncRNA | downstream | 235020 | 28261837 ~ 28262116 (+) | True | G1680969 |
| XM_021576342.2 | mRNA | upstream | 57189 | 27943767 ~ 27969322 (+) | True | adss2 |
| XM_036955522.1 | mRNA | upstream | 159999 | 27864868 ~ 27866512 (+) | False | lhb |
| NM_001124205.1 | mRNA | upstream | 160000 | 27865523 ~ 27866511 (+) | True | lhb |
| XM_021576335.2 | mRNA | upstream | 168416 | 27815217 ~ 27858095 (+) | False | arfgef3 |
| XM_021576348.2 | mRNA | downstream | 472 | 28027289 ~ 28169772 (+) | False | akt3a |
| XM_021576349.2 | mRNA | downstream | 472 | 28027289 ~ 28169772 (+) | True | akt3a |
| XM_021576351.2 | mRNA | downstream | 199093 | 28225910 ~ 28293688 (+) | False | cep170aa |
| XM_021576352.2 | mRNA | downstream | 199095 | 28225912 ~ 28293688 (+) | False | cep170aa |
| XM_021576350.2 | mRNA | downstream | 199096 | 28225913 ~ 28293688 (+) | False | cep170aa |
| TU1922082 | other | upstream | 650692 | 27375354 ~ 27375819 (+) | True | G1680230 |
| TU1921636 | other | upstream | 939048 | 27084426 ~ 27087463 (+) | True | G1679823 |
| TU1920883 | other | upstream | 1250831 | 26700392 ~ 26775680 (+) | True | G1679135 |
| TU1920840 | other | upstream | 1370400 | 26654627 ~ 26656111 (+) | True | LOC110499259 |
| TU1920824 | other | upstream | 1393313 | 26632135 ~ 26633198 (+) | True | LOC110499256 |
| TU1923119 | other | downstream | 690544 | 28717361 ~ 28726495 (+) | True | G1681180 |
| TU1923788 | other | downstream | 751189 | 28778006 ~ 28778409 (+) | True | G1681792 |
| TU1924556 | other | downstream | 1430411 | 29457228 ~ 29457921 (+) | True | lhcgr |
| TU1924589 | other | downstream | 1545618 | 29572435 ~ 29576558 (+) | False | LOC110499316 |
| TU1924591 | other | downstream | 1547941 | 29574758 ~ 29576558 (+) | True | LOC110499316 |
