Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1923895 |
| length | 228 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1681897 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 28875825 ~ 28876052 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1923868 | lncRNA | upstream | 19992 | 28855561 ~ 28855833 (+) | True | G1681870 |
| TU1923843 | lncRNA | upstream | 40590 | 28834917 ~ 28835235 (+) | True | G1681846 |
| TU1923832 | lncRNA | upstream | 46945 | 28828681 ~ 28828880 (+) | True | G1681835 |
| TU1923816 | lncRNA | upstream | 66819 | 28808747 ~ 28809006 (+) | True | G1681820 |
| TU1923793 | lncRNA | upstream | 91334 | 28784274 ~ 28784491 (+) | True | G1681797 |
| TU1923913 | lncRNA | downstream | 8620 | 28884672 ~ 28884968 (+) | True | G1681914 |
| TU1924003 | lncRNA | downstream | 75218 | 28951270 ~ 28951508 (+) | True | G1682002 |
| TU1924006 | lncRNA | downstream | 77279 | 28953331 ~ 28953537 (+) | True | G1682005 |
| TU1924009 | lncRNA | downstream | 80475 | 28956527 ~ 28956746 (+) | True | G1682008 |
| TU1924082 | lncRNA | downstream | 166097 | 29042149 ~ 29043742 (+) | True | G1682067 |
| XM_021576373.2 | mRNA | upstream | 23497 | 28849051 ~ 28852328 (+) | True | six3a |
| XM_021576372.2 | mRNA | upstream | 130244 | 28548493 ~ 28745581 (+) | True | camkmt |
| XM_021576370.2 | mRNA | upstream | 341237 | 28525469 ~ 28534588 (+) | True | slc3a1 |
| XM_036956123.1 | mRNA | upstream | 350732 | 28478802 ~ 28525093 (+) | False | ppm1ba |
| XR_002469936.2 | mRNA | downstream | 16126 | 28892178 ~ 28936652 (+) | True | LOC110499307 |
| XM_036956130.1 | mRNA | downstream | 251687 | 29127739 ~ 29280630 (+) | True | LOC110499309 |
| XM_036956132.1 | mRNA | downstream | 409833 | 29285885 ~ 29353539 (+) | False | LOC110499310 |
| XM_036956131.1 | mRNA | downstream | 409834 | 29285886 ~ 29356101 (+) | True | LOC110499310 |
| trnaa-ugc-146 | mRNA | downstream | 514268 | 29390320 ~ 29390393 (+) | True | trnaa-ugc-146 |
| TU1923788 | other | upstream | 97416 | 28778006 ~ 28778409 (+) | True | G1681792 |
| TU1923119 | other | upstream | 149330 | 28717361 ~ 28726495 (+) | True | G1681180 |
| TU1922082 | other | upstream | 1500006 | 27375354 ~ 27375819 (+) | True | G1680230 |
| TU1921636 | other | upstream | 1788362 | 27084426 ~ 27087463 (+) | True | G1679823 |
| TU1920883 | other | upstream | 2100145 | 26700392 ~ 26775680 (+) | True | G1679135 |
| TU1924556 | other | downstream | 581176 | 29457228 ~ 29457921 (+) | True | lhcgr |
| TU1924589 | other | downstream | 696383 | 29572435 ~ 29576558 (+) | False | LOC110499316 |
| TU1924591 | other | downstream | 698706 | 29574758 ~ 29576558 (+) | True | LOC110499316 |
| TU1928807 | other | downstream | 3778302 | 32654354 ~ 32661648 (+) | True | G1686317 |
| TU1929194 | other | downstream | 4301241 | 33177293 ~ 33185276 (+) | True | LOC118942060 |
