Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00050301 |
| length | 291 |
| RNA type | processed_transcript |
| GC content | 0.54 |
| exon number | 3 |
| gene id | XLOC_025512 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 33345347 ~ 33379440 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-071004-82 | Orthologous to human MPP2 (membrane palmitoylated protein 2). |
| ensembl_id | ENSDART00000171844 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052727 | lncRNA | upstream | 150632 | 33193368 ~ 33194715 (+) | True | XLOC_025509 |
| TCONS_00052351 | lncRNA | upstream | 300325 | 33043644 ~ 33045022 (+) | True | XLOC_025507 |
| TCONS_00052350 | lncRNA | upstream | 301797 | 33041307 ~ 33043550 (+) | True | XLOC_025506 |
| TCONS_00052725 | lncRNA | upstream | 316320 | 32976882 ~ 33029027 (+) | False | XLOC_025505 |
| TCONS_00052726 | lncRNA | upstream | 316320 | 33005838 ~ 33029027 (+) | True | XLOC_025505 |
| TCONS_00050305 | lncRNA | downstream | 21251 | 33384282 ~ 33388967 (+) | False | XLOC_025513 |
| TCONS_00052728 | lncRNA | downstream | 21332 | 33384363 ~ 33419664 (+) | True | XLOC_025513 |
| TCONS_00052729 | lncRNA | downstream | 197061 | 33560092 ~ 33573516 (+) | False | XLOC_025517 |
| TCONS_00052730 | lncRNA | downstream | 199224 | 33562255 ~ 33573516 (+) | False | XLOC_025517 |
| TCONS_00052731 | lncRNA | downstream | 199297 | 33562328 ~ 33573516 (+) | True | XLOC_025517 |
| TCONS_00050299 | mRNA | upstream | 567 | 33340939 ~ 33344780 (+) | False | XLOC_025511 |
| TCONS_00050300 | mRNA | upstream | 568 | 33341640 ~ 33344779 (+) | True | XLOC_025511 |
| TCONS_00050298 | mRNA | upstream | 44026 | 33300522 ~ 33301321 (+) | True | XLOC_025510 |
| TCONS_00050296 | mRNA | upstream | 393297 | 32933663 ~ 32952050 (+) | True | XLOC_025504 |
| TCONS_00050295 | mRNA | upstream | 475292 | 32868092 ~ 32870055 (+) | True | XLOC_025503 |
| TCONS_00050304 | mRNA | downstream | 4923 | 33367954 ~ 33379440 (+) | True | XLOC_025512 |
| TCONS_00050307 | mRNA | downstream | 77584 | 33440615 ~ 33459764 (+) | True | XLOC_025515 |
| TCONS_00050309 | mRNA | downstream | 381983 | 33745014 ~ 33754115 (+) | True | XLOC_025518 |
| TCONS_00050310 | mRNA | downstream | 398518 | 33761549 ~ 33762726 (+) | True | XLOC_025519 |
| TCONS_00050311 | mRNA | downstream | 555479 | 33918510 ~ 33922150 (+) | True | XLOC_025520 |
| TCONS_00050297 | other | upstream | 296957 | 33045883 ~ 33048390 (+) | True | XLOC_025508 |
| TCONS_00050288 | other | upstream | 497321 | 32842794 ~ 32848026 (+) | False | XLOC_025502 |
| TCONS_00050268 | other | upstream | 673384 | 32671190 ~ 32671963 (+) | False | XLOC_025494 |
| TCONS_00050265 | other | upstream | 681601 | 32661991 ~ 32663746 (+) | False | XLOC_025493 |
| TCONS_00050254 | other | upstream | 773976 | 32571309 ~ 32571371 (+) | True | XLOC_025487 |
| TCONS_00050306 | other | downstream | 44557 | 33407588 ~ 33407710 (+) | True | XLOC_025514 |
| TCONS_00050308 | other | downstream | 87069 | 33450100 ~ 33450219 (+) | True | XLOC_025516 |
| TCONS_00050312 | other | downstream | 715169 | 34078200 ~ 34079170 (+) | True | XLOC_025521 |
| TCONS_00050319 | other | downstream | 795844 | 34158875 ~ 34159072 (+) | True | XLOC_025527 |
| TCONS_00050321 | other | downstream | 798186 | 34161217 ~ 34171032 (+) | True | XLOC_025526 |
