Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1927643 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1685272 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 31699885 ~ 31700108 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1927633 | lncRNA | upstream | 9557 | 31690078 ~ 31690328 (+) | True | G1685262 |
| TU1927613 | lncRNA | upstream | 29943 | 31662665 ~ 31669942 (+) | True | G1685242 |
| TU1927582 | lncRNA | upstream | 63637 | 31636022 ~ 31636248 (+) | True | G1685211 |
| TU1927573 | lncRNA | upstream | 71779 | 31627883 ~ 31628106 (+) | True | G1685202 |
| TU1927572 | lncRNA | upstream | 72170 | 31627488 ~ 31627715 (+) | True | G1685201 |
| TU1927644 | lncRNA | downstream | 844 | 31700952 ~ 31701183 (+) | True | G1685273 |
| TU1927645 | lncRNA | downstream | 2701 | 31702809 ~ 31703020 (+) | True | G1685274 |
| TU1927646 | lncRNA | downstream | 3439 | 31703547 ~ 31703795 (+) | True | G1685275 |
| TU1927647 | lncRNA | downstream | 3927 | 31704035 ~ 31704366 (+) | True | G1685276 |
| TU1927648 | lncRNA | downstream | 4287 | 31704395 ~ 31704671 (+) | True | G1685277 |
| XR_005037978.1 | mRNA | upstream | 188708 | 31495094 ~ 31511177 (+) | True | LOC110499596 |
| XM_036955550.1 | mRNA | upstream | 258889 | 31440277 ~ 31440996 (+) | True | LOC118942000 |
| XM_036956153.1 | mRNA | upstream | 1458419 | 30219786 ~ 30241466 (+) | True | LOC110499324 |
| XM_021576403.2 | mRNA | upstream | 1482238 | 30194269 ~ 30217647 (+) | True | LOC110499323 |
| XM_021576400.2 | mRNA | upstream | 1639698 | 30025625 ~ 30060187 (+) | True | msh6 |
| XM_036956183.1 | mRNA | downstream | 13598 | 31713706 ~ 31725878 (+) | False | erlec1 |
| XM_036956184.1 | mRNA | downstream | 13598 | 31713706 ~ 31725878 (+) | True | erlec1 |
| XM_036956188.1 | mRNA | downstream | 122652 | 31822760 ~ 31978074 (+) | False | wdr27 |
| XM_036956187.1 | mRNA | downstream | 122676 | 31822784 ~ 31978074 (+) | False | wdr27 |
| XM_036956189.1 | mRNA | downstream | 334091 | 32034199 ~ 32073088 (+) | False | thbs2a |
| TU1924589 | other | upstream | 2123327 | 29572435 ~ 29576558 (+) | False | LOC110499316 |
| TU1924591 | other | upstream | 2123327 | 29574758 ~ 29576558 (+) | True | LOC110499316 |
| TU1924556 | other | upstream | 2241964 | 29457228 ~ 29457921 (+) | True | lhcgr |
| TU1923788 | other | upstream | 2921476 | 28778006 ~ 28778409 (+) | True | G1681792 |
| TU1923119 | other | upstream | 2973390 | 28717361 ~ 28726495 (+) | True | G1681180 |
| TU1928807 | other | downstream | 954246 | 32654354 ~ 32661648 (+) | True | G1686317 |
| TU1929194 | other | downstream | 1477185 | 33177293 ~ 33185276 (+) | True | LOC118942060 |
| TU1930380 | other | downstream | 2625729 | 34325837 ~ 34326254 (+) | True | G1687675 |
| TU1932015 | other | downstream | 3681601 | 35381709 ~ 35384566 (+) | False | LOC110499396 |
| TU1932017 | other | downstream | 3681601 | 35381709 ~ 35384566 (+) | False | LOC110499396 |
