RNA id: TU1933054


Basic Information

Item Value
RNA id TU1933054
length 278
lncRNA type intronic
GC content 0.27
exon number 2
gene id G1690063
representative False

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36186601 ~ 36187944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aatagaacagaacagaatagaatagaacagaatagaatagaatagaacagaatagaacagaaaagaatagaacagaacagaacagaatagaacagaacagaatataatagaacagaatagaatagaacagaacagaatagaacagaatagaatagaacagaatagaatagaacagaatagaatagaacagaatagaacagaatagaatagaatagaacagaatagaatagaacagaatagaatataacagaatagaatagaacagaatagaatagaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1932979 lncRNA downstream 3029 36181083 ~ 36183572 (-) True LOC110499429
TU1932978 lncRNA downstream 69432 36115938 ~ 36117169 (-) True LOC118942067
TU1932981 lncRNA downstream 148854 36031153 ~ 36037747 (-) True LOC110499423
TU1932876 lncRNA downstream 304795 35881499 ~ 35881806 (-) True G1689916
TU1932882 lncRNA downstream 307328 35879037 ~ 35879273 (-) True G1689922
TU1933058 lncRNA upstream 5970 36193653 ~ 36193996 (-) True G1690065
TU1933283 lncRNA upstream 58436 36246119 ~ 36247511 (-) True G1690257
TU1933285 lncRNA upstream 59918 36247601 ~ 36248692 (-) True G1690259
TU1933333 lncRNA upstream 64256 36251939 ~ 36253293 (-) True G1690286
TU1933335 lncRNA upstream 65945 36253628 ~ 36253828 (-) True G1690287
XR_005037994.1 mRNA downstream 61164 36120611 ~ 36125437 (-) False LOC110499427
XM_036956285.1 mRNA upstream 72157 36259840 ~ 36336446 (-) False LOC110499540
XM_036956289.1 mRNA upstream 72157 36259840 ~ 36336446 (-) False LOC110499540
XR_005037999.1 mRNA upstream 72157 36259840 ~ 36336446 (-) False LOC110499540
XM_036956290.1 mRNA upstream 72157 36259840 ~ 36336447 (-) False LOC110499540
XM_036956286.1 mRNA upstream 72157 36259840 ~ 36336450 (-) False LOC110499540
TU1932968 other downstream 61203 36120507 ~ 36125398 (-) False LOC110499427
TU1932966 other downstream 61203 36120632 ~ 36125398 (-) False LOC110499427
TU1932967 other downstream 61203 36120632 ~ 36125398 (-) True LOC110499427
TU1932874 other downstream 319817 35865700 ~ 35866784 (-) True LOC110499416
TU1932446 other downstream 542824 35643368 ~ 35643777 (-) True G1689556
TU1933425 other upstream 232033 36419716 ~ 36420600 (-) True G1690367
TU1933722 other upstream 514863 36702546 ~ 36703441 (-) True G1690649
TU1933771 other upstream 622016 36809699 ~ 36810143 (-) True G1690696
TU1933942 other upstream 705864 36893547 ~ 36896206 (-) True LOC110499438
TU1934589 other upstream 1051144 37238827 ~ 37239310 (-) True G1691432

Expression Profile